| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5262720 = | 59 (1.090) | 6 (0.120) | 5/250 | NT | 9.5% | coding (893/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase |
| ? | NC_002947 | 5262767 = | 57 (1.100) | coding (940/1488 nt) | PP_4638 | methylenetetrahydrofolate reductase | |||||
AAGGTCACCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5262771‑5262720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACTGCTGTTCAGCCGGCGCAACAGCCTGAGCAAGGCCTTCGGC > NC_002947/5262767‑5262910 AAGGTCACCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCAT < 3:272124/142‑1AAGGTCACCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCAT > 4:272124/1‑142 GGTCACCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTGATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCAC > 5:233490/1‑149 CCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACT > 2:286683/1‑149 CCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCC‑GG‑CGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACTGC > 3:97616/1‑149 CCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACTGCT < 1:286683/149‑1 CGGTGACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACTGCTGTTCAGCCGGCGCAACAGCCTGAGCAAGGCCTTCGGC > 4:162980/1‑149 AAGGTCACCGCCGGCAGGCCAGGCATCTGCCAGCTGGCGTGCCAGGCCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5262771‑5262720‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgACCTTCCATCCGCCACAGGCTGGCTGGCGCCTGGACGAGTCACGGGTCGATGCCTCATTCAAGGAAAAAGCCCGCTATCACCTGATGCATGGCATGCACGCACTGCTGTTCAGCCGGCGCAACAGCCTGAGCAAGGCCTTCGGC > NC_002947/5262767‑5262910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |