| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5303181 = | 61 (1.130) | 5 (0.100) | 5/242 | NT | 8.3% | coding (592/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| ? | NC_002947 | 5303223 = | 54 (1.070) | coding (550/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease | |||||
CCTGTTCACCCAGACCCTGGAAACCGACCACAGCGAGTTGTTGGGCCAGGTCATGCGCGATTACTGGCGGCGCTTCTGCTATGGGATGCAAGGTGACGCACTGGCCTGGGTGCGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5303332‑5303181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcgcaCCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGGGTGAACAGGCTGCCGCTGTCGAAGGCATGCTCGCGCAGCATGCGCT > NC_002947/5303223‑5303369 CCTGTTCACCCAGACCCTGGAAACCGACCACAGCGAGTTGTTGGGCCAGGTCATGCGCGATTACTGGCGGCGCTTCTGCTATGGGATGCAAGGTGACGCACTGGCCTGGGTGCGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCac < 4:79965/149‑3 GTTCACCCAGACCCTGGAAACCGACCACAGCGAGTTGTTGGGCCAGGTCATGCGCGATTACTGGCGGCGCTTCTGCTATGGGATGCAAGGTGACGCACTGGCCTGGGTGCGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCA > 5:219016/1‑149 GCGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCCACAACTCGCTGTGGTCGGTTTCCAGGGTGTGGGTGAg > 5:29411/1‑146 CGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGGGT < 7:193645/143‑1 CGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGGGT > 8:193645/1‑143 GGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGG < 7:158334/138‑1 GGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGG > 8:158334/1‑138 CACCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGGGTGAACAGGCTGCCGCTGTCGAAGGCATGCTCGCGCAGCATGCGCT < 8:289652/149‑1 CCTGTTCACCCAGACCCTGGAAACCGACCACAGCGAGTTGTTGGGCCAGGTCATGCGCGATTACTGGCGGCGCTTCTGCTATGGGATGCAAGGTGACGCACTGGCCTGGGTGCGCGGCAACTGGGGGAGCCCAGATGCCTTGCTGCCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5303332‑5303181‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcgcaCCCAGGCCAGTGCGTCACCTTGCATCCCATAGCAGAAGCGCCGCCAGTAATCGCGCATGACCTGGCCCAACAACTCGCTGTGGTCGGTTTCCAGGGTCTGGGTGAACAGGCTGCCGCTGTCGAAGGCATGCTCGCGCAGCATGCGCT > NC_002947/5303223‑5303369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |