| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5456121 | 54 (1.000) | 4 (0.080) | 4/244 | NT | 6.0% | intergenic (‑80/‑148) | PP_4793/leuS | hypothetical protein/leucine‑‑tRNA ligase |
| ? | NC_002947 | = 5456157 | 74 (1.460) | intergenic (‑116/‑112) | PP_4793/leuS | hypothetical protein/leucine‑‑tRNA ligase | |||||
CAGTGCCAGGCCAAGCCGGTCGATCAGGCGCTCGTAAAGCTCCGGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5455967‑5456121‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgcgCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAATCAGACC < NC_002947/5456157‑5456010 gAGTGCCAGGCCTAGCCGGTCGATGAGGCGCTCGTAAAGCTCCGGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGC < 1:325544/148‑1CAGTGCCAGGCCAAGCCGGTCGATCAGGCGCTCGTAAAGCTCCGGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGC > 1:281882/1‑149 GTGCCAGGCCAAGCCGGTCGATCAGGCGCTCGTAAAGCTCCGGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGC > 5:253100/1‑149 GGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTC > 7:311340/1‑149 ATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCG > 6:104470/1‑149 ATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGC < 8:311340/148‑1 CGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACG < 5:104470/149‑1 GCCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAAT > 5:187451/1‑148 CCGCGCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAATCA < 6:187451/149‑1 GCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAATCAGACC < 1:297819/149‑1 GCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAATCAGACC < 8:305522/149‑1 CAGTGCCAGGCCAAGCCGGTCGATCAGGCGCTCGTAAAGCTCCGGTCTGATTGCGGGTAGCTGCGTCTCTCCCATCCGTTCACCTCATTGAAGGTAAGAATATCTCCCCCCACACCTGAGCTTAGCGTCGCTGCAAAAAGCAGCCGTGCGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5455967‑5456121‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgcgCATCGTGGGAAACCTTCGTTGCGAATGGCCGCTGGTCGCGGCGCACGGCTGCTTTTTGCAGCGACGCTAAGCTCAGGTGTGGGGGGAGATATTCTTACCTTCAATGAGGTGAACGGATGGGAGAGACGCAGCTACCCGCAATCAGACC < NC_002947/5456157‑5456010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |