| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5476362 = | 61 (1.130) | 3 (0.060) | 3/246 | NT | 5.4% | coding (592/1317 nt) | PP_4813 | PAP2 family protein/DedA family protein |
| ? | NC_002947 | 5476400 = | 48 (0.940) | coding (630/1317 nt) | PP_4813 | PAP2 family protein/DedA family protein | |||||
CGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCCGAGGAATACACCGGCCAGGGCGATGAAGCTGAGCGCGGCAACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5476515‑5476362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggtTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGAT > NC_002947/5476400‑5476547 CGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCCGAGGAATACACCGGCCAGGGCGATGAAGCTGAGCGCGGCAACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGG < 1:91165/149‑1CGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCCGAGGAATACACCGGCCAGGGCGATGAAGCTGAGCGCGGCAACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGG < 2:244/149‑1 GATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCCGAGGAATACACCGGCCAGGGCGATGAAGCTGAGCGCGGCAACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGGCTG < 8:118060/148‑1 AACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCA > 5:61069/1‑149 GCCGGGTGCCGTGGCGCTGGTCACGCAGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAG > 7:127347/1‑95 GCCGGGTGCCGTGGCGCTGGTCACGCAGGCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAG < 8:127347/95‑1 GCTGGTTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAG < 2:91165/149‑1 TTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGAT < 1:244/149‑1 CGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCCGAGGAATACACCGGCCAGGGCGATGAAGCTGAGCGCGGCAACCAGCCGGGTGCCGTGGCGCTGGTCACGCAGGCTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5476515‑5476362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctggtTGCCGCGCTCAGCTTCATCGCCCTGGCCGGTGTATTCCTCGGCTGGCCCTACTTCCATGAGTTCGACCAAGGCGTGATGACACTGGTCCAGGAGCATCGCAGCCAGGCCATCGACGGCACCGTGGTGCTGGTGACACGGCTAGGCGAT > NC_002947/5476400‑5476547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |