| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5496970 = | 50 (0.920) | 3 (0.060) | 3/244 | NT | 6.3% | coding (43/1212 nt) | cobL | precorrin‑6Y C(5,15)‑methyltransferase |
| ? | NC_002947 | 5497075 = | 43 (0.850) | coding (148/1212 nt) | cobL | precorrin‑6Y C(5,15)‑methyltransferase | |||||
GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5497125‑5496970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgaaCAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTGGCCAGCGGTGACCCTATGTTCTA‑CGGCGTCGGCGCCAGCCTGGCACGCCAGGTGCCTGCTGCAGAAATGCGC > NC_002947/5497075‑5497218 GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGC < 5:224092/149‑1 cacccGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCC > 6:19310/6‑149 GAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCG < 4:99015/149‑1 AAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGC < 3:7428/149‑1 GCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTG > 6:73779/1‑147 GTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGG > 6:352479/1‑149 TTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAACAGTTGGCCTGGCCCAGCACGTTCTCGCTTGCCCCAGTGCTGGC > 5:345888/1‑149 GCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTG < 5:352479/149‑1 GAAGAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTGGCGAGCGGTGACCCTATGTTCTA‑CGGCGTCGGCGCCAGCC < 7:87553/115‑1 GAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTGGCCAGCGGTGACCCTATCTTCTA‑CGGCGTCGGCCCCAGCC > 8:87553/1‑115 AACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTGGCCAGCGGTGACCCTATGTTCTACCGGCGTCGGCGCCAGCCTGGCACGCCAGGTGCCTGCTGCAGAAATGCGC < 1:81409/147‑1 GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5497125‑5496970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctgaaCAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCGGCGAGCCGGTGTGCGTGCTGGCCAGCGGTGACCCTATGTTCTA‑CGGCGTCGGCGCCAGCCTGGCACGCCAGGTGCCTGCTGCAGAAATGCGC > NC_002947/5497075‑5497218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |