New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5619213 =	58 (1.070)	3 (0.060)	3/244	NT	5.1%	coding (462/606 nt)	PP_4937	toluene tolerance protein
	?	NC_002947	5619250 =	57 (1.120)					coding (499/606 nt)	PP_4937	toluene tolerance protein

CAGCTGACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5619367‑5619213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcggccCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGGTCAGCTGCGCAACAGGCTCTGCGAGCCGCTG  >  NC_002947/5619250‑5619391                                                                                                                                                                                                                                                                                                           CAGCTGACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATG                                                                                                                                                      >  4:108744/1‑149  AGCTGACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGT                                                                                                                                                     >  5:183619/1‑149    CTGACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCG                                                                                                                                                   <  3:247562/149‑1       ACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGC                                                                                                                                                 <  1:20685/148‑1       ACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGG                                                                                                                                                  <  5:251953/147‑1       ACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGG                                                                                                                                                  <  6:183619/147‑1                                                                                                                 CATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAG                                                         <  5:170297/130‑1                                                                                                                 CATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAG                                                         >  6:170297/1‑130                                                                                                                      GGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCAGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGG                                 >  5:254079/1‑149                                                                                                                                                      TCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGGTCAGCTGCGCAACAGGCTCTGCGAGCCGCTG  >  1:32623/1‑148                                                                                                                                                      TCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGGTCAGCTGCGCAACAGGCTCTGCGAGC       >  3:171438/1‑143                                                                                                                                                      TCGGCCCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGGTCAGCTGCGCAACAGGCTCTGCGAGC       <  4:171438/143‑1                                                                                                                                                           CCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCC                                                                         >  1:178681/1‑72                                                                                                                                                           CCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCC                                                                         <  2:178681/72‑1                                                                                                                                                                                                                                                                                                           CAGCTGACCTTCAGCGTGTCAGCAAGGCTGCCTCGAAGGCGGCAAGGGGGAACCGGTCGCCCAGGTTCTCCCGCTCGATATAGCGCACCATGTGCTGCACATTGCGTCGAATCATGCGGGCCGACAGTGGCGGGCGCAAAAAGCGCATGTCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5619367‑5619213 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcggccCGCATGATTCGACGCAATGTGCAGCACATGGTGCGCTATATCGAGCGGGAGAACCTGGGCGACCGGTTCCCCCTTGCCGCCTTCGAGGCAGCCTTGCTGACACGCTGAAGGTCAGCTGCGCAACAGGCTCTGCGAGCCGCTG  >  NC_002947/5619250‑5619391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.