New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5825124 = | 54 (1.000) | 3 (0.060) | 3/250 | NT | 5.1% | coding (349/723 nt) | trmB | tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
? | NC_002947 | 5825210 = | 60 (1.150) | coding (263/723 nt) | trmB | tRNA (guanosine(46)‑N7)‑methyltransferase TrmB |
CCTGAGCAGGATTTCATCGGTGTGGAAGTGCACCGCCCGGGTGTTGGCGCGCTGCTCAATGGCGTGCTGACCCAGGGGCTGAAAAACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5825214‑5825124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcTCAGGTGCGGCAGCGGCCATTTCCAGCAGGGAATGGCCCATGCCGAAGCCGATCTCCAAGGTGCGCGGGGCCGAACG > NC_002947/5825210‑5825286 CCTGAGCAGGATTTCATCGGTGTGGAAGTGCACCGCCCGGGTGTTGGCGCGCTGCTCAATGGCGTGCTGACCCAGGGGCTGAAAAACCTGCTCAGGTGCGGCAGCGGCCATTTCCAGCAGGGAATGGCCCATGCCGAAGCCGATCTCC > 6:257481/1‑148 CTGAGCAGGATTTCATCGGTGTGGAAGTGCACCGCCCGGGTGTTGGCGCGCTGCTCAATGGCGTGCTGACCCAGGGGCTGAAAAACCTGCTCAGGTGCGGCAGCGGCCATTTCCAGCAGGGAATGGCCCATGCCGAAGCCGATCTCC > 3:46113/1‑147 GTGTGGAAGTGCACCGCCCGGGTGTTGGCGCGCTGCTCAATGGCGTGCTGACCCAGGGGCTGAAAAACCTGCTCAGGTGCGGCAGCGGCCATTTCCAGCAGGGAATGGCCCATGCCGAAGCCGATCTCCAAGGTGCGCGGGGCCGAACG < 5:257481/149‑1 CCTGAGCAGGATTTCATCGGTGTGGAAGTGCACCGCCCGGGTGTTGGCGCGCTGCTCAATGGCGTGCTGACCCAGGGGCTGAAAAACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5825214‑5825124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcTCAGGTGCGGCAGCGGCCATTTCCAGCAGGGAATGGCCCATGCCGAAGCCGATCTCCAAGGTGCGCGGGGCCGAACG > NC_002947/5825210‑5825286 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |