| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5976547 = | 63 (1.160) | 3 (0.060) | 3/244 | NT | 5.0% | coding (348/1491 nt) | yifB | ATP‑dependent chelatase |
| ? | NC_002947 | 5976606 = | 54 (1.060) | coding (407/1491 nt) | yifB | ATP‑dependent chelatase | |||||
CAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976700‑5976547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcgcTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCT > NC_002947/5976606‑5976747 CAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACC < 4:331701/148‑1 GTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGC < 8:151944/149‑1 GCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCC > 3:265760/1‑148 CCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACGGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACC > 3:5302/1‑149 CCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGC < 4:5302/149‑1 CGGGCGCTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCT < 4:265760/149‑1 CAGGTGGGCGACCAACTCCAGCAGGTGGCCCACCGCATACACCACCAACCCGCCGGCCAGGCTGGCTTCCTCGGCATTTTCCCGTGGTACCACCAGCGCCCGGCCTGCTTCGCGTGCCGCCAGTGCCGCAGGTAGCACGCCCTGCACCGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5976700‑5976547‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggcgcTGGTGGTACCACGGGAAAATGCCGAGGAAGCCAGCCTGGCCGGCGGGTTGGTGGTGTATGCGGTGGGCCACCTGCTGGAGTTGGTCGCCCACCTGAACGGCCAGGTGCCGCTACCGCCCTACGCCGCCAACGGTTTGATCCT > NC_002947/5976606‑5976747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |