| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6014689 = | 78 (1.440) | 6 (0.120) | 5/248 | NT | 7.5% | coding (1076/1860 nt) | PP_5266 | acetyl‑CoA hydrolase family protein |
| ? | NC_002947 | 6014720 = | 74 (1.440) | coding (1045/1860 nt) | PP_5266 | acetyl‑CoA hydrolase family protein | |||||
CTGGCCGAAGCAGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6014816‑6014689‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcaAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGTGGG > NC_002947/6014720‑6014866 CTGGCCGAAGCAGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGCGCGCA < 3:29381/128‑1CTGGCCGAAGCAGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGCGCGCA > 4:29381/1‑128 AGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGC > 1:239014/1‑112 AGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGC < 2:239014/112‑1 TTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAG > 5:340674/1‑135 TTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAG < 6:340674/135‑1 TTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAA > 7:19600/1‑66 TTGCGCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAA < 8:19600/66‑1 GCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTC < 7:28171/103‑1 GCGAGATGCCGCTGGAGCAGCGCGCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTC > 8:28171/1‑103 GCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGT < 5:183577/149‑1 GCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGC < 4:263393/146‑1 GCGCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAG < 1:261546/145‑1 GCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGTGG < 3:286935/149‑1 GCAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGTGG < 6:137984/149‑1 CAAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGTTGG < 4:254831/149‑1 CTGGCCGAAGCAGGGCTGCTACGACGCCCGGCGGACGAGCAGGGCGCAATACTGCATGGCGGCTTTTTTCTCGGCCCGCAAGCGTTCTACCAGCGCTTGCGCGAGATGCCGCTGGAGCAGCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6014816‑6014689‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcaAGCGCTGGTAGAACGCTTGCGGGCCGAGAAAAAAGCCGCCATGCAGTATTGCGCCCTGCTCGTCCGCCGGGCGTCGTAGCAGCCCTGCTTCGGCCAGCACCAGCAGGCCGTTGACGAACATCTCGCTGCAGCCGTACAAGCCGTGGG > NC_002947/6014720‑6014866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |