| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6090811 = | 68 (1.260) | 4 (0.080) | 4/252 | NT | 6.1% | coding (676/1530 nt) | PP_5342 | GntR family transcriptional regulator |
| ? | NC_002947 | 6090841 = | 57 (1.090) | coding (646/1530 nt) | PP_5342 | GntR family transcriptional regulator | |||||
CCTGCACAACTGGGCTATGGTGACCCCGCTGGCGAGCCGGCTTTGCGCGATCTGATAGCGGCCTATCTACGCCGCTCGCGGGGGCTGAGCTGTACGGCTGAACAAATTGTGATCACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6090961‑6090811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAGTTGTGCAGGCGATGGGTTGCGCCAGAAACCCGCC > NC_002947/6090841‑6090986 CCTGCACAACTGGGCTATGGTGACCCCGCTGGCGAGCCGGCTTTGCGCGATCTGATAGCGGCCTATCTACGCCGCTCGCGGGGGCTGAGCTGTACGGCTGAACAAATTGTGATCACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTG > 1:331523/1‑148 CTGCACAACTGGGCTATGGTGACCCCGCTGGCGAGCCGGCTTTGCGCGATCTGATAGCGGCCTATCTACGCCGCTCGCGGGGGCTGAGCTGTACGGCTGAACAAATTGTGATCACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCA > 6:103459/1‑149 TGCACAACTGGGCTATGGTGACCCCGCTGGCGAGCCGGCTTTGCGCGATCTGATAGCGGCCTATCTACGCCGCTCGCGGGGGCTGAGCTGTACGGCTGAACAAATTGTGATCACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCA > 4:43175/1‑148 ACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCACCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAG > 5:293013/1‑149 AAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCACCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTAT < 1:164436/102‑1 AAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCACCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTAT > 2:164436/1‑102 GTGCGCAGCAGGCCATCAGCCTTTGTGCACCGCTTGTGATGACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAGTTGTGCA < 6:293013/149‑1 GCACCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAGTTGTGCAGGCGATGGGTTGCGCCAGAAACCCGC < 5:37803/149‑1 CACCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAGTTGTGCAGGCGATGGGTTGCGCCAGAAACCCGCC < 5:99146/149‑1 CCTGCACAACTGGGCTATGGTGACCCCGCTGGCGAGCCGGCTTTGCGCGATCTGATAGCGGCCTATCTACGCCGCTCGCGGGGGCTGAGCTGTACGGCTGAACAAATTGTGATCACAAGCGGTGCGCAGCAGGCCATCAGCCTTTGTGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6090961‑6090811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacCGCTTGTGATCACAATTTGTTCAGCCGTACAGCTCAGCCCCCGCGAGCGGCGTAGATAGGCCGCTATCAGATCGCGCAAAGCCGGCTCGCCAGCGGGGTCACCATAGCCCAGTTGTGCAGGCGATGGGTTGCGCCAGAAACCCGCC > NC_002947/6090841‑6090986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |