New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6110503 =	72 (1.330)	4 (0.080)	4/248	NT	5.5%	coding (1007/1209 nt)	PP_5361	protein P47K
	?	NC_002947	6110547 =	70 (1.360)					coding (963/1209 nt)	PP_5361	protein P47K

ACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6110655‑6110503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgaaGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTC  >  NC_002947/6110547‑6110690                                                                                                                                                                                                                                                                                                           ACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACA                                                                                                                                                      >  4:167907/1‑149                                                                                                          GCGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACagctcg                                              >  3:328644/1‑142                                                                                                          GCGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAA                                                     <  4:328644/141‑1                                                                                                           CGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGTAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTT                                               <  7:308273/146‑1                                                                                                           CGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGTAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTT                                               >  8:308273/1‑146                                                                                                                                                    CACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGT   <  1:342743/149‑1                                                                                                                                                    CACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCAAGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGT   <  4:117494/149‑1                                                                                                                                                     ACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTC  >  8:74372/1‑149                                                                                                                                                     ACGAAGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGACCTCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCTGTAGCCTTCCGTTTTCCGAGTCCTTGTGGATAAAGTC  <  1:346831/149‑1                                                                                                                                                                                                                                                                                                           ACTGCGTTCCAAAGGGTTTTTCTGGTTGGCCAGCAAATATCAGGAAGCTGGCAGCTGGTCGCAAGCGGGCGGCATGATGCGCCATGGTCTGGCTGGCCGCTGGTGGCGCTTCGTGCCACGCGAGCAGTGGCCACAGGATGTGGATAACACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6110655‑6110503 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgaaGCGCCACCAGCGGCCAGCCAGACCATGGCGCATCATGCCGCCCGCTTGCGACCAGCTGCCAGCTTCCTGATATTTGCTGGCCAACCAGAAAAACCCTTTGGAACGCAGTAGCCTTCCGTTTTCCCAGTCCTTGTGGATAAAGTC  >  NC_002947/6110547‑6110690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.