New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 602690 | 38 (0.700) | 4 (0.080) | 4/248 | NT | 7.9% | coding (196/1110 nt) | ribAB‑I | bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II |
? | NC_002947 | = 602753 | 57 (1.110) | coding (259/1110 nt) | ribAB‑I | bifunctional 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/GTP cyclohydrolase II |
GAAGACATCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACTGTGCA > NC_002947/602543‑602838 | gAAGACATCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAt > 8:35735/1‑149 (MQ=255) gAAGACATCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAt > 2:94328/1‑149 (MQ=255) gAAGACATCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGA < 3:211080‑M1/148‑1 (MQ=255) aTCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCcg > 5:65933/1‑149 (MQ=255) gggCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGtt > 6:208570/1‑149 (MQ=255) aaTGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGaaa < 5:303062/149‑1 (MQ=255) atggatgACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGTGTTGCGAAACGCTGAAGCTGc < 2:223330/148‑1 (MQ=255) atggatgACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGcc < 2:90039/149‑1 (MQ=255) tgACGAAGATCGCGAGAACCAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGa < 5:155138/149‑1 (MQ=255) cGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTg > 2:28684/1‑123 (MQ=255) cGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTg < 1:28684/123‑1 (MQ=255) gAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCATCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCCTTTATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATgg < 1:94328/149‑1 (MQ=255) cgcgAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCcgcg > 6:21998/1‑149 (MQ=255) cgAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaac > 6:89170‑M1/1‑98 (MQ=255) gagaACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCAAGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCaa > 5:298879/1‑149 (MQ=255) gAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTc > 3:12835/1‑149 (MQ=255) ggCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggt > 7:149469‑M1/1‑88 (MQ=255) ggCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACCCCCGGGGCG‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGATGCCGTTCATGCCGCCGCGCAACGGCTCgg‑‑g > 6:87535/1‑149 (MQ=255) gACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGa > 6:275035/1‑124 (MQ=255) gACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGa < 5:275035/124‑1 (MQ=255) gACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTt < 3:172930‑M2/149‑2 (MQ=255) gACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTt > 5:208570‑M2/1‑148 (MQ=255) catcatGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTtcggca > 5:21998‑M2/1‑143 (MQ=255) atcatGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcat < 8:149469‑M1/149‑71 (MQ=255) atGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgc < 5:89170‑M1/148‑73 (MQ=255) gcggcCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGtt > 2:276020/1‑149 (MQ=255) ggcCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCTGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCa > 3:48863/1‑149 (MQ=255) gcCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCGGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCAc < 4:191779/149‑1 (MQ=255) aTGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCgtgt < 3:29922/149‑1 (MQ=255) tgcCAGCCGGAGCACATCAACTTCATGGCCAAGCACGTCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCAc > 4:109642/1‑140 (MQ=255) tgcCAGCCGGAGCACATCAACTTCATGGCCAAGCACGTCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCAc < 3:109642/140‑1 (MQ=255) gcCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTtcgg < 7:210064‑M2/127‑5 (MQ=255) gcCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTtcgg > 8:210064‑M2/1‑123 (MQ=255) cGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGgcc > 7:230840/1‑149 (MQ=255) gAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGgccgc > 8:140002/1‑149 (MQ=255) caTCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAgg < 8:230840/149‑1 (MQ=255) aTCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAggg > 5:77479/1‑149 (MQ=255) cAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCg > 2:242341/1‑149 (MQ=255) aaCTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGt < 6:77479/149‑1 (MQ=255) aCTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTc < 4:172930/149‑1 (MQ=255) ttCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAgg < 4:7084/133‑1 (MQ=255) tGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCaccacc < 4:12835/149‑1 (MQ=255) ggCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCg > 5:71887/1‑149 (MQ=255) ccAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGt < 5:304558/149‑1 (MQ=255) cAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTa > 1:270251/1‑149 (MQ=255) aCGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTcc < 6:71887/149‑1 (MQ=255) cccGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGGCCGCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTccg < 1:276020/149‑1 (MQ=255) ccGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCATCGGTATTTccgccg > 5:214080/1‑149 (MQ=255) c‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACcg > 8:18620/1‑149 (MQ=255) gATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACcgcg > 7:218655/1‑149 (MQ=255) gCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTtcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggcagcattcggccgccat < 5:89170‑M2/148‑77 (MQ=255) aTGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTtcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggcagcattcggccgccatgat < 8:149469‑M2/149‑80 (MQ=255) tGCCGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggcagcattcggccgccatgatg > 5:21998‑M1/1‑6 (MQ=255) ccGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggc < 7:210064‑M1/127‑124 (MQ=255) ccGAagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggc > 8:210064‑M1/1‑4 (MQ=255) cGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACtgtg < 7:18620/149‑1 (MQ=255) cGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACtgtg > 3:52573/1‑149 (MQ=255) gATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACtgtg > 3:280739/1‑148 (MQ=255) aagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggcagcattcggccgccatgatgatgtc > 5:208570‑M1/1‑1 (MQ=255) aagcccgagccgttgcgcggcgccatcaacggcagcttcagcgtttcgcaacgctcgcgggtcatcggcatgcagatcaggccacgggcgtgcttggccatgaagttgatgtgctccggctggcagcattcggccgccatgatgatgtc < 3:172930‑M1/149‑149 (MQ=255) aTGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACTGTGCa < 7:35735/149‑1 (MQ=255) | GAAGACATCCGCCAGGGCAAAATGGTCATCCTGATGGATGACGAAGATCGCGAGAACGAAGGCGACATCATCATGGCGGCCGAATGCTGCCAGCCGGAGCACATCAACTTCATGGCCAAGCACGCCCGTGGCC‑TGATCTGCATGCCGATGACCCGCGAGCGTTGCGAAACGCTGAAGCTGCCGTTGATGGCGCCGCGCAACGGCTCGG‑‑GCTTCGGCACCAAGTTCACCGTGTCGATCGAGGCCGCCGAGGGCGTCACCACCGGTATTTCCGCCGCCGACCGCGCACGCACTGTGCA > NC_002947/602543‑602838 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |