New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 695523 =84 (1.550)6 (0.120) 6/244 NT 7.0% intergenic (+17/‑57) PP_0596/mmsA‑I omega‑amino acid‑‑pyruvate aminotransferase/methylmalonate‑semialdehyde dehydrogenase
?NC_002947 695554 = 81 (1.600)intergenic (+48/‑26) PP_0596/mmsA‑I omega‑amino acid‑‑pyruvate aminotransferase/methylmalonate‑semialdehyde dehydrogenase

GTGGAAAGCGGGCTTCTATGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCC  >  NC_002947/695377‑695669
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ttgcgcggctggccagttcgaccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGc                                                                                                                                                   <  2:9039‑M1/2‑1 (MQ=255)
ttgcgcggctggccagttcgaccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGc                                                                                                                                                   >  3:231216‑M1/148‑149 (MQ=255)
 tgGAAAGCGGGCTTCTATGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGc                                                                                                                                                   >  6:148725/1‑147 (MQ=255)
   gAAAGCGGGCTTCTATGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACAGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAgg                                                                                                                                               >  1:336647/1‑149 (MQ=255)
    gcggctggccagttcgaccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAgg                                                                                                                                               <  4:10589‑M1/6‑1 (MQ=255)
    gcggctggccagttcgaccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAgg                                                                                                                                               <  5:80628‑M1/6‑1 (MQ=255)
    gcggctggccagttcgaccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAgg                                                                                                                                               <  7:308098‑M1/6‑1 (MQ=255)
       gCGGGCTTCTATGTGCGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTa                                                                                                                                           >  7:97487/1‑149 (MQ=255)
        cGGGCTTCTATGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCgcgc                                                                                                                                          >  4:132297/1‑146 (MQ=255)
                 aTGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAg                                                                                                                                                <  1:344894/134‑1 (MQ=255)
                 aTGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAg                                                                                                                                                >  2:344894/1‑134 (MQ=255)
                   gTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAgcgc                                                                                                                               >  1:278628/1‑149 (MQ=255)
                    taagCTTTTGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGTCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAgcgc                                                                                                                               <  5:321905/145‑1 (MQ=255)
                     ccttgcgaacggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAgcgcg                                                                                                                              <  2:156129‑M1/23‑1 (MQ=255)
                     aCGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAgcgcgc                                                                                                                             >  1:262301/1‑149 (MQ=255)
                       gCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAgcgcgcgc                                                                                                                           >  1:110036/1‑149 (MQ=255)
                            ggtggCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGTTGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTgg                                                                                                                       <  8:97487/148‑1 (MQ=255)
                             gtggCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGAACTTTCCGATATTGATGCCAGGAGTATGCCCGCAGCCCGCGCCTGGct                                                                                                                     >  3:21644/1‑149 (MQ=255)
                             acggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAGCGCGCGCCTGGc                                                                                                                      >  7:292149‑M1/119‑149 (MQ=255)
                              tggCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGctc                                                                                                                    <  2:110036/149‑1 (MQ=255)
                               ggcctggccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAGCGCGCGCCTGGctc                                                                                                                    >  5:276507‑M1/117‑149 (MQ=255)
                               ggCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGc                                                                                                                                              <  5:271876/122‑1 (MQ=255)
                               ggCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGc                                                                                                                                              >  6:271876/1‑122 (MQ=255)
                                 cGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGTGCCTGGCTCTcc                                                                                                                 <  2:278628/149‑1 (MQ=255)
                                    cacCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCttt                                                                                                              <  4:150422/149‑1 (MQ=255)
                                     gccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCttt                                                                                                              <  6:279753‑M1/39‑1 (MQ=255)
                                      cccTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGt                                                                                                            <  5:148725/149‑1 (MQ=255)
                                      ccagtggacgggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTg                                                                                                             >  1:156129‑M1/110‑149 (MQ=255)
                                        cTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGtt                                                                                                           >  7:248825/1‑148 (MQ=255)
                                        cTGCAGTTCGGCCCAACCCTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGtt                                                                                                           >  5:4475/1‑148 (MQ=255)
                                           cAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATc                                                                                                       >  3:275419/1‑149 (MQ=255)
                                                ggttgaagacatcggcggtgcgctcacccttggtaaccagttcgccgtgaatcaggtgctgaacaatgctcatgcaaaactccagataaacaaaggagaGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGa                                                                                                   >  5:279753‑M1/100‑149 (MQ=255)
                                                     cAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTg                                                                                             >  6:153225/1‑149 (MQ=255)
                                                      aaCCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGc                                                                                            <  6:16544/149‑1 (MQ=255)
                                                          ttCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGc                                                                                            >  8:176457/1‑145 (MQ=255)
                                                          ttCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGc                                                                                            <  7:176457/145‑1 (MQ=255)
                                                           tCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAg                                                                                       >  5:238685/1‑149 (MQ=255)
                                                            cAATAGCTAGCCGCATTAACTGGACGGCTTGTTCTATGTTGTTGGCGAAACGCTGAACCTGTTCTACTGATCTTTCCGATATTGATGCCAGGCGGATGCCCGCAGCGCGCGCATGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAg                                                                                       <  4:21644/148‑1 (MQ=255)
                                                            cAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGa                                                                                        <  4:275419/147‑1 (MQ=255)
                                                            cAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGa                                                                                        <  2:262301/147‑1 (MQ=255)
                                                            cAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGa                                                                                        <  5:176503/147‑1 (MQ=255)
                                                             aaTACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTg                                                                                             <  7:148533/141‑1 (MQ=255)
                                                             aaTACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTg                                                                                             >  8:148533/1‑141 (MQ=255)
                                                              aTACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCAt                                                                                    >  4:91557/1‑149 (MQ=255)
                                                                  cAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTg                                                                                                             >  8:243802/1‑120 (MQ=255)
                                                                  cAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGtt                                                                                <  5:102516/149‑1 (MQ=255)
                                                                  cAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGt                                                                                 >  5:13872/1‑148 (MQ=255)
                                                                  cAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGt                                                                                 >  3:11394/1‑148 (MQ=255)
                                                                  cAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTCATCGACTGATATTACCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTATTGCATCACCAATGt                                                                                 >  1:331352/1‑148 (MQ=255)
                                                                  cAAGCCGCAGGAACTGCACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTg                                                                                                             <  7:243802/120‑1 (MQ=255)
                                                                       cGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCAt                                                                                    >  5:173728/1‑140 (MQ=255)
                                                                       cGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCAt                                                                                    <  6:173728/140‑1 (MQ=255)
                                                                       cGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCa                                                                           >  3:329791/1‑149 (MQ=255)
                                                                         cAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCAcc                                                                         <  6:4475/149‑1 (MQ=255)
                                                                                tGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTc                                                                   >  5:266982/1‑148 (MQ=255)
                                                                                 ggACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCAc                                                                 >  4:213394/1‑149 (MQ=255)
                                                                                  gACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACg                                                                <  3:213394/149‑1 (MQ=255)
                                                                                     cGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGtt                                                                                                           >  1:118807/1‑103 (MQ=255)
                                                                                     cGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGtt                                                                                                           <  2:118807/103‑1 (MQ=255)
                                                                                          gTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCGTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTg                                                        >  8:308098/1‑149 (MQ=255)
                                                                                           ttCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTgg                                                       >  8:276547/1‑149 (MQ=255)
                                                                                              gATGCTGTTGGCGAAACCCTGAACCTGATCGACTTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCa                                                                                                                                   >  1:41975/1‑71 (MQ=255)
                                                                                              gATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCa                                                                                                                                   <  2:41975/70‑1 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTg                                                                                                             >  5:304055/1‑86 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTg                                                                                                             <  6:304055/86‑1 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGtttt                                                                                              >  5:27718/1‑101 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGtttt                                                                                              <  6:27718/101‑1 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTc                                                                               <  8:153913/116‑1 (MQ=255)
                                                                                                    gTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTc                                                                               >  7:153913/1‑116 (MQ=255)
                                                                                                        gCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGt                                            >  7:107865/1‑147 (MQ=255)
                                                                                                        gCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGt                                            >  1:84143/1‑147 (MQ=255)
                                                                                                        gCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTCTGCATGAGCAtt                                                                                   <  5:217740/108‑1 (MQ=255)
                                                                                                        gCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTCTGCATGAGCAtt                                                                                   >  6:217740/1‑108 (MQ=255)
                                                                                                          gAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCa                                                                              >  8:185702/1‑111 (MQ=255)
                                                                                                          gAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCa                                                                              <  7:185702/111‑1 (MQ=255)
                                                                                                               ccTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCAcc                                   >  7:4829/1‑149 (MQ=255)
                                                                                                               ccTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTAAGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCAcc                                   >  1:244104/1‑149 (MQ=255)
                                                                                                                cTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCa                                                                              >  3:276998/1‑105 (MQ=255)
                                                                                                                cTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCa                                                                              <  4:276998/105‑1 (MQ=255)
                                                                                                                cTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGt                                            <  6:58333/139‑1 (MQ=255)
                                                                                                                cTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGt                                            >  5:58333/1‑139 (MQ=255)
                                                                                                                cTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCAGGCTCTCCATTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGTTCAGAGCAccg                                  >  7:149357/1‑149 (MQ=255)
                                                                                                                      cTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATg                            >  3:10589/1‑149 (MQ=255)
                                                                                                                         aTCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCt                         <  7:276547/149‑1 (MQ=255)
                                                                                                                            gACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCTCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCTTTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTc                       <  2:331352/148‑1 (MQ=255)
                                                                                                                                  aTCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCg                 >  8:121121/1‑149 (MQ=255)
                                                                                                                                  aTCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCg                 >  7:183952/1‑149 (MQ=255)
                                                                                                                                  aTCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCg                 >  3:337030/1‑149 (MQ=255)
                                                                                                                                    cTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCt                         >  8:116395/1‑139 (MQ=255)
                                                                                                                                    cTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCt                         <  7:116395/139‑1 (MQ=255)
                                                                                                                                     tttCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTc               >  1:131042/1‑148 (MQ=255)
                                                                                                                                     tttCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTc               >  5:263642/1‑148 (MQ=255)
                                                                                                                                      ttCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTcc              >  6:9666/1‑148 (MQ=255)
                                                                                                                                       tCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTc               <  3:91557/146‑1 (MQ=255)
                                                                                                                                       tCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCAc            >  3:54932/1‑149 (MQ=255)
                                                                                                                                         cGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATTAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACt           <  6:238685/148‑1 (MQ=255)
                                                                                                                                          gATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTgg         <  8:183952/149‑1 (MQ=255)
                                                                                                                                           atatTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGc        <  8:248825/149‑1 (MQ=255)
                                                                                                                                                 aTGCCAGGCGTATGCCCGCAGCGCGCTCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGcc  >  1:9039/1‑149 (MQ=255)
                                                                                                                                                 aTGCCAGGCGTATGCCCACAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGcc  >  3:322833/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GTGGAAAGCGGGCTTCTATGTACGCTTTGGTGGCGACACCCTGCAGTTCGGCCCAACCTTCAATACCAAGCCGCAGGAACTGGACCGCTTGTTCGATGCTGTTGGCGAAACCCTGAACCTGATCGACTGATCTTTCCGATATTGATGCCAGGCGTATGCCCGCAGCGCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGGCC  >  NC_002947/695377‑695669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.