New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 931659 =57 (1.050)4 (0.080) 4/244 NT 6.1% coding (13963/18933 nt) PP_0806 surface adhesion protein
?NC_002947 931733 = 69 (1.360)coding (13889/18933 nt) PP_0806 surface adhesion protein

CCGGAAACGGCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCGGCGCGACGCGG  >  NC_002947/931511‑931807
                                                                                                                                                       |                                                                                                                                                    
ccGGAAACGGCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGaa                                                                                                                                                      <  6:299363/149‑1 (MQ=255)
ccGGAAACGGCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGaa                                                                                                                                                      <  7:240684/149‑1 (MQ=255)
    aaaCGGCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGTCTACCCCGGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAg                                                                                                                                                     <  1:287860/149‑1 (MQ=255)
       acagctcagcgccagccagtccgatgtggccggcaacgagtccaacagcgtcagcctcacagcccctgaccgcgtcgcgccggatgctgccggcaacctggccttcgccgggggtggcagcttgctgaacggtaccggcgaagcAGGTg                                                                                                                                                  >  4:293399‑M1/145‑149 (MQ=255)
        ggCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGt                                                                                                                                              >  1:44279/1‑149 (MQ=255)
          ccAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGcc                                                                                                                                                <  8:177914/145‑1 (MQ=255)
          ccAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGcc                                                                                                                                                >  7:177914/1‑145 (MQ=255)
           cAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCgg                                                                                                                                           >  8:175515/1‑149 (MQ=255)
            aGTTCGCGGGGTGCCGATGGCTGTGTGGTCTCGGGT‑‑‑GAGGTGATCGAGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCTTCTCCTCTTGCTCCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGTTGCCGTCGgc                                                                                                                                          <  8:128500/149‑1 (MQ=255)
                         ccGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCa                                                                                                                             >  6:268205/1‑149 (MQ=255)
                                        tATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGaa                                                                                                              <  6:193212/149‑1 (MQ=255)
                                        tATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGaa                                                                                                              <  1:66183/149‑1 (MQ=255)
                                                    cggtcctAGCGCTGGCGGCAGACTGGATGCCTGCCGCATCGGCCAGCACCACTTGCCCCTGTTGGCCGGTGGCCTGAGGCCATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATcggcg                                                                                                     <  6:289953/143‑1 (MQ=255)
                                                    cGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATcggcg                                                                                                     <  5:268205/149‑1 (MQ=255)
                                                           aGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGCCCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGca                                                                                              >  7:29830/1‑149 (MQ=255)
                                                             cgcTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGcaca                                                                                            >  5:238854/1‑149 (MQ=255)
                                                              gcTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAg                                                                                                >  2:193578/1‑144 (MQ=255)
                                                              gcTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAg                                                                                                <  1:193578/144‑1 (MQ=255)
                                                                    ggcAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCAcgg                                                                                     >  5:271447/1‑149 (MQ=255)
                                                                      cAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCAcggcg                                                                                   >  2:300095/1‑149 (MQ=255)
                                                                       cctgaccgcgtcgcgccggatgctcccggcaacctggccttctccgggggtggcagcttgctgaacggtaccggcgaagcAGGTGCCGACGGCGCGCCCAGTGTCACTGACCACCACCGCACCATCCGCGGCGAGCCCACtcacggagg                                                                                  <  2:162170‑M1/69‑4 (MQ=255)
                                                                         tgaccgcgtcgcgccggatgctgccggcaacctggccttcgccgggggtggcagcttgctgaacggtaccggcgaagcAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCa                                                                                <  6:267102‑M1/71‑1 (MQ=255)
                                                                           tGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCAcc                                                                              >  2:191503/1‑149 (MQ=255)
                                                                           accgcgtcgcgcctgatgctcccggcaacctggccttcgccgggggtggcagcttgctgaacggtaccggcgaagcAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCa                                                                                >  1:162170‑M1/77‑147 (MQ=255)
                                                                            ccgcgtcgcgccggatgctgccggcaacctggccttcgccgggggtggcagcttgctgaacggtaccggcgaagcAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCt                                                                             >  5:267102‑M1/76‑149 (MQ=255)
                                                                              ttGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGcc                                                                                                                                                >  1:277278/1‑80 (MQ=255)
                                                                              ttGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGcc                                                                                                                                                <  2:277278/80‑1 (MQ=255)
                                                                                 cctgccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTc                                                                        >  5:75299/1‑149 (MQ=255)
                                                                                  ctgccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCg                                                                       >  5:266155/1‑149 (MQ=255)
                                                                                   tgccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCCTCGGCGGCGAGAACACGCCCGGCGGAACCTGCTTCGc                                                                      >  8:220650/1‑149 (MQ=255)
                                                                                    gccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGCGCACACGCACGGCGGCACCTGCTTCGcc                                                                     >  7:152137/1‑149 (MQ=255)
                                                                                    gccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGcc                                                                     >  5:102567/1‑149 (MQ=255)
                                                                                     ccGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGc                                                                      <  6:238854/147‑1 (MQ=255)
                                                                                        cATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTa                                                                 >  8:274426/1‑149 (MQ=255)
                                                                                          tCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTAcc                                                               >  1:32943/1‑149 (MQ=255)
                                                                                             gCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGtt                                                            >  5:212113/1‑149 (MQ=255)
                                                                                             gCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGtt                                                            >  7:294985/1‑149 (MQ=255)
                                                                                             gCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGGCTGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGtt                                                            <  7:220650/149‑1 (MQ=255)
                                                                                               cAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCa                                                          <  7:274426/149‑1 (MQ=255)
                                                                                                     cacTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGc                                                    >  2:92205/1‑149 (MQ=255)
                                                                                                          gCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGc                                                 <  6:102567/147‑1 (MQ=255)
                                                                                                            aCCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCAcc                                             >  6:45914/1‑149 (MQ=255)
                                                                                                                 ttggccgttggccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCgg                                        >  3:228516/1‑149 (MQ=255)
                                                                                                                   ggccgttggccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCa                                                          <  6:226516/129‑1 (MQ=255)
                                                                                                                   ggccgttggccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCa                                                          >  5:226516/1‑129 (MQ=255)
                                                                                                                    gccgttggccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCg                                      >  2:154919/1‑148 (MQ=255)
                                                                                                                      cgttggccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAg                                   <  4:228516/149‑1 (MQ=255)
                                                                                                                      cgtgggccGGAGGCGATACGAGCTTGACCTGGAAGGGGCCGGCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAg                                   <  4:247671/149‑1 (MQ=255)
                                                                                                                            ccTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAgg                             <  6:266155/149‑1 (MQ=255)
                                                                                                                                aGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTg                          <  1:154919/148‑1 (MQ=255)
                                                                                                                                aGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGc                         <  8:231664/149‑1 (MQ=255)
                                                                                                                                aGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGc                         >  7:231664/1‑149 (MQ=255)
                                                                                                                                    gATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACGGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTGCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgc                     <  6:271447/149‑1 (MQ=255)
                                                                                                                                     aTACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCgg                      >  4:183192/1‑147 (MQ=255)
                                                                                                                                     aTACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgca                    <  6:75299/149‑1 (MQ=255)
                                                                                                                                     aTACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgca                    <  2:32943/149‑1 (MQ=255)
                                                                                                                                      tACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgcag                   >  3:9057/1‑149 (MQ=255)
                                                                                                                                         gAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgca                    <  2:204266/145‑1 (MQ=255)
                                                                                                                                         gAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGgca                    >  1:204266/1‑145 (MQ=255)
                                                                                                                                          aGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCgg                                        <  6:305493/124‑1 (MQ=255)
                                                                                                                                          aGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCgg                                        >  5:305493/1‑124 (MQ=255)
                                                                                                                                          aGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATc               <  1:191503/149‑1 (MQ=255)
                                                                                                                                           ggTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACAGTTCAGCAAGCTGCCACCCCCGGCGAAGGCAACGTTGCCGGCAGCATcc              >  8:227764/1‑149 (MQ=255)
                                                                                                                                            gTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCg             >  7:180398/1‑149 (MQ=255)
                                                                                                                                            gTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCg             >  7:175458/1‑149 (MQ=255)
                                                                                                                                                     gAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCgg            <  4:233473/141‑1 (MQ=255)
                                                                                                                                                     gAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCgg            >  3:233473/1‑141 (MQ=255)
                                                                                                                                                     gAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCGGCGCGAcgc    <  1:300095/149‑1 (MQ=255)
                                                                                                                                                     gAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCGGCGCGAcg     <  8:29830/148‑1 (MQ=255)
                                                                                                                                                       AGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCGGCGCGACGCgg  <  7:180266‑M1/149‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                    
CCGGAAACGGCCAGTTCGCCGGGTGCCGATGGCGGTGTGGTATCGGGT‑‑‑GCGGTGATAGCGCTGGCGGCAGACTGGTTGCCTGCCGCATCGGCCAGCACCACTTGCACCTGTTGGCCGTTGGCCTGAGGCGATACGAGGTTGACCTGGAAGGTGCCGTCGGCGCGCACAGTGGCACTGCCCAGCACCGAACCATCGGCGGCGAGCACACGCACGGCGGCACCTGCTTCGCCGGTACCGTTCAGCAAGCTGCCACCCCCGGCGAAGGCCAGGTTGCCGGCAGCATCCGGCGCGACGCGG  >  NC_002947/931511‑931807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.