New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1136268 =	67 (1.240)	3 (0.060)	3/246	NT	5.1%	coding (707/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
	?	NC_002947	1136319 =	49 (0.960)					coding (656/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein

CCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCT  >  NC_002947/1136122‑1136411                                                                                                                                                    |                                                                                                                                                cccaccttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGc                                                                                                                                                >  6:155216‑M1/148‑149 (MQ=255) ccAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAAGGGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACgg                                                                                                                                                 >  1:76715/1‑148 (MQ=255)  cAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCAt                                                                                                                                              <  3:78896/149‑1 (MQ=255)   caccttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCAt                                                                                                                                              >  5:233866‑M1/146‑149 (MQ=255)    gTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATgg                                                                                                                                            <  3:8297/149‑1 (MQ=255)    accttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATg                                                                                                                                             <  8:157035‑M1/5‑1 (MQ=255)      cttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGc                                                                                                                                           >  3:183265‑M1/143‑149 (MQ=255)       ttcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggattcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGc                                                                                                                                           <  6:166600‑M1/7‑1 (MQ=255)       ccATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCa                                                                                                                                          <  3:219051/148‑1 (MQ=255)       ccATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAg                                                                                                                                         >  7:80188/1‑149 (MQ=255)        tcgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGc                                                                                                                                           <  1:22638‑M1/7‑1 (MQ=255)         cgcgtatgggcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGc                                                                                                                                           <  3:171840‑M1/7‑1 (MQ=255)         aTCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGgc                                                                                                                                       >  8:270970/1‑149 (MQ=255)         aTCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGgc                                                                                                                                       <  7:52668/149‑1 (MQ=255)            aGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGcgcg                                                                                                                                    >  5:268949/1‑149 (MQ=255)             gCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCgg                                                                                                                                   <  2:28356/149‑1 (MQ=255)              cccAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCggg                                                                                                                                  >  4:295150/1‑149 (MQ=255)              cccAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCggg                                                                                                                                  >  5:82409/1‑149 (MQ=255)              cccAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCggg                                                                                                                                  >  8:282699/1‑149 (MQ=255)              cccAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCggg                                                                                                                                  >  5:87138/1‑149 (MQ=255)                  gcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATg                                                                                                                                             >  4:310177‑M1/131‑135 (MQ=255)                  gcgaacgcctgtcggccctgcaccacgaccacgccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATg                                                                                                                                             <  3:310177‑M1/5‑1 (MQ=255)                   gCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGCCGGCATGGCAGGCGCGGGCTAc                                                                                                                              >  6:350695/1‑148 (MQ=255)                   gCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTAc                                                                                                                              >  5:39178/1‑148 (MQ=255)                         cACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCt                                                                                                                       <  4:174409/149‑1 (MQ=255)                          aCCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCtt                                                                                                                      <  6:313911/149‑1 (MQ=255)                          aCCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCtt                                                                                                                      >  4:88977/1‑149 (MQ=255)                          aCCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCAAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCtt                                                                                                                      >  1:220682/1‑149 (MQ=255)                              cgTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGACATGGCAGGCGCGGGCTACCAGTTCTTTa                                                                                                                    >  2:314681/1‑147 (MQ=255)                              cgTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGACATGGCAGGCGCGGGCTACCAGTTCTTTa                                                                                                                    <  1:314681/147‑1 (MQ=255)                                ttGTGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCgg                                                                                                                >  2:317928/1‑149 (MQ=255)                                     cgcCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCg                                                                                                           <  8:80188/149‑1 (MQ=255)                                     cgcCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCg                                                                                                           <  8:194489/149‑1 (MQ=255)                                             aa‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGcc                                                                                                   <  7:282699/149‑1 (MQ=255)                                                ggCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCAt                                                                                                 <  6:39178/149‑1 (MQ=255)                                                 gCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCGATg                                                                                                >  6:155588/1‑149 (MQ=255)                                                  gccgaaggcttcgatgccttgctgggcgagtcgccggccatccgcaccctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGc                                                                                               >  5:300591‑M1/99‑149 (MQ=255)                                                  ccccGGGCGCGTAGCCAAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGc                                                                                               <  2:220682/149‑1 (MQ=255)                                                   cccGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCa                                                                                              >  8:36794/1‑149 (MQ=255)                                                      gggCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCa                                                                                                                            >  4:157765/1‑116 (MQ=255)                                                      gggCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCa                                                                                                                            <  3:157765/116‑1 (MQ=255)                                                                ccGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTg                                                                                  >  3:266178/1‑148 (MQ=255)                                                                 cGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCGATGCACCAGCAGCGGTGCa                                                                                <  5:155588/149‑1 (MQ=255)                                                                 cGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCACATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                   >  4:60813/1‑146 (MQ=255)                                                                 cGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCACATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                   <  3:60813/146‑1 (MQ=255)                                                                  gAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCAt                                                                               <  1:273742/149‑1 (MQ=255)                                                                  gAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCAt                                                                               <  7:270970/149‑1 (MQ=255)                                                                         tCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                              <  5:77269/143‑1 (MQ=255)                                                                         tCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATc                                                                              >  6:77269/1‑143 (MQ=255)                                                                          cGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                   >  6:109859/1‑137 (MQ=255)                                                                          cGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGt                                                                                   <  5:109859/137‑1 (MQ=255)                                                                           gCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGAACCAGCAGCGGTGCATCGAGCGCAg                                                                      >  5:166600/1‑149 (MQ=255)                                                                           gCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCCGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCa                                                                       <  4:7977/148‑1 (MQ=255)                                                                            cTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGc                                                                     >  5:354259/1‑149 (MQ=255)                                                                               tCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCTGTGCATCGAGCGCAGCCAc                                                                  >  2:59843/1‑149 (MQ=255)                                                                                cGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcg                                                                 >  3:164132/1‑149 (MQ=255)                                                                                 ggCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgc                                                                <  3:295150/149‑1 (MQ=255)                                                                                  gCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                               >  5:261737/1‑149 (MQ=255)                                                                                  gCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                               >  8:179132/1‑149 (MQ=255)                                                                                   ccAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCAcgcg                                                               >  3:242683/1‑148 (MQ=255)                                                                                     aGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGt                                                              >  6:1518/1‑147 (MQ=255)                                                                                             gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                                      <  6:268949/147‑1 (MQ=255)                                                                                             gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                                      <  4:266178/147‑1 (MQ=255)                                                                                             gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCgg                                                     <  5:182485/148‑1 (MQ=255)                                                                                             gggCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTCACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGcgcg                                                      <  5:350695/147‑1 (MQ=255)                                                                                                  ctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACca                                                                                           <  7:138704‑M1/55‑1 (MQ=255)                                                                                                  ctcaaggcccgcgccttacgcgtggctgcgctcgatgcaccgctgctggtGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACca                                                                                           >  8:138704‑M1/51‑105 (MQ=255)                                                                                                     cggcgCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTg                                               >  5:162611/1‑146 (MQ=255)                                                                                                     cggcgCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTg                                               <  6:162611/146‑1 (MQ=255)                                                                                                                  ggCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCg                               >  7:122399/1‑149 (MQ=255)                                                                                                                      aGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGa                           <  1:317928/149‑1 (MQ=255)                                                                                                                        gAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACt                         >  4:250034/1‑149 (MQ=255)                                                                                                                             gggCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGccc                    <  2:76715/149‑1 (MQ=255)                                                                                                                                 cGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCa                <  7:36794/149‑1 (MQ=255)                                                                                                                                  gCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGc                 >  5:290127/1‑147 (MQ=255)                                                                                                                                   cATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAg              <  6:290127/149‑1 (MQ=255)                                                                                                                                       gcggcTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCAt          <  3:250034/149‑1 (MQ=255)                                                                                                                                           ctgctgACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGaa      <  6:261737/149‑1 (MQ=255)                                                                                                                                           ctgctgACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGaa      <  6:87138/149‑1 (MQ=255)                                                                                                                                           ctgctgACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGaa      <  6:82409/149‑1 (MQ=255)                                                                                                                                              ctgACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGcc   >  4:141476/1‑149 (MQ=255)                                                                                                                                               tgACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCt  >  2:22638/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                CCAGTTCCATCAGCCCAGGCTTGCCACCGCGTTGCGCGCCGGTAAA‑GGCCCCGGGCGCGTAGCCGAACAGCTCGCTTTCGGCCAGGCTCTCGGGCAGCGCGGCGCAGTTCAGGGCCAGGAACGGGGCCGCATGGCGGCTGCTGACGGCATGGCAGGCGCGGGCTACCAGTTCTTTACCGGTGCCGGTCTCGCCATGCACCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCT  >  NC_002947/1136122‑1136411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.