New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1365283	66 (1.220)	4 (0.080)	4/242	NT	6.4%	coding (195/699 nt)	PP_1189	hypothetical protein
	?	NC_002947	= 1365320	56 (1.110)					coding (158/699 nt)	PP_1189	hypothetical protein

CCGGGCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTCCTTGAAA  >  NC_002947/1365137‑1365430                                                                                                                                                   |                                                                                                                                                       ccGGGCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggtg                                                                                                                                                      <  7:102652/149‑1 (MQ=255)  cGGGCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggtg                                                                                                                                                      >  6:125182/1‑148 (MQ=255)   gggCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggtgg                                                                                                                                                     >  1:180155/1‑148 (MQ=255)    ggCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaa                                                                                                                                                   <  1:92024/149‑1 (MQ=255)     gCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaac                                                                                                                                                  >  5:248006/1‑149 (MQ=255)     gCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaa                                                                                                                                                   >  6:230903/1‑148 (MQ=255)      cTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaaca                                                                                                                                                 <  4:101203/149‑1 (MQ=255)       tCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacag                                                                                                                                                >  4:256649/1‑149 (MQ=255)         cACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacagg                                                                                                                                               <  8:258280/148‑1 (MQ=255)         cACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacagg                                                                                                                                               >  5:190928/1‑148 (MQ=255)          aCGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaa                                                                                                                                             >  1:323364/1‑149 (MQ=255)          aCGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaa                                                                                                                                             <  5:343202/149‑1 (MQ=255)           cGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaa                                                                                                                                             >  8:101620/1‑148 (MQ=255)            gCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGaacaggtcagcca                                                                                                                                           >  2:83980‑M1/1‑136 (MQ=255)            gCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaa                                                                                                                                             >  3:4314/1‑147 (MQ=255)                 cccggCGCACCACCGACTCGCCGATGCCGGCGGGCCGGGGGGCGGCGCGGGGGGCGAACACCCCCATGCGCTAGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCCCCAGGGCCTGGCGGAACAGGAACagcagc                                                                                                                                      <  8:73293/146‑1 (MQ=255)                  cAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACagcagc                                                                                                                                      <  2:180155/148‑1 (MQ=255)                   aGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCca                                                                                                                                    <  4:310426/149‑1 (MQ=255)                          ccaccGACTGGCCGATGCCGTTGGGCCGGAGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTACTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACCCATgg                                                                                                                             >  1:200506/1‑149 (MQ=255)                             ccGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTg                                                                                                                          <  4:4314/149‑1 (MQ=255)                              cGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGa                                                                                                                         <  7:101620/149‑1 (MQ=255)                               gACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGAc                                                                                                                        <  3:337890/149‑1 (MQ=255)                                aCTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCt                                                                                                                           <  8:43903/145‑1 (MQ=255)                                aCTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCt                                                                                                                           >  7:43903/1‑145 (MQ=255)                                    gCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGt‑‑t                                                                                                                 <  3:256649/149‑1 (MQ=255)                                     ccGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tc                                                                                                                >  5:125182‑M2/1‑148 (MQ=255)                                      cGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tcc                                                                                                               >  6:248006‑M2/1‑147 (MQ=255)                                       gATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAAcagc                                                                                                                                         <  4:274383/124‑1 (MQ=255)                                       gATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAAcagc                                                                                                                                         >  3:274383/1‑124 (MQ=255)                                           ccGTTGGGCCGGTGGGTGGCGCGGGGGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tccaggcc                                                                                                          >  3:184082‑M2/1‑142 (MQ=255)                                            cGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaaca                                                                                                                                           <  4:297700/117‑1 (MQ=255)                                            cGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaacaggaaca                                                                                                                                           >  3:297700/1‑117 (MQ=255)                                             gTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tccaggccct                                                                                                        <  7:292397‑M2/149‑10 (MQ=255)                                              ttGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaac                                                                                                                                                  <  4:33896/108‑1 (MQ=255)                                              ttGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTggaac                                                                                                                                                  >  3:33896/1‑108 (MQ=255)                                                gggCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGaacaggtcagccatgtgtggctgctgttcctgttccaccaggccctgg                                                                                                        <  1:83980‑M1/148‑49 (MQ=255)                                                      gtgggtggCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggt                                                                                                                                                       >  7:152922/1‑95 (MQ=255)                                                      gtgggtggCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggt                                                                                                                                                       <  8:152922/95‑1 (MQ=255)                                                          gtggCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCAcc                                                                                          >  1:198457/1‑149 (MQ=255)                                                           tggCGCGGGTGGCGAACACCCCCATGCGCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCt                                                                                         <  3:334991/149‑1 (MQ=255)                                                             gcgcGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGt                                                                                                                    <  1:168612/123‑1 (MQ=255)                                                             gcgcGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGt                                                                                                                    >  2:168612/1‑123 (MQ=255)                                                               gcgGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggtg                                                                                                                                                      >  5:72415/1‑87 (MQ=255)                                                               gcgGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCtggtg                                                                                                                                                      <  6:72415/87‑1 (MQ=255)                                                                    tGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAAc                                                                                <  3:7444/149‑1 (MQ=255)                                                                      gCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAAcgg                                                                              >  3:312943/1‑149 (MQ=255)                                                                       cGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAAcggc                                                                             <  8:292397/149‑1 (MQ=255)                                                                       cGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAAcggc                                                                             <  5:230903/149‑1 (MQ=255)                                                                       cGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAAcggc                                                                             >  7:257287/1‑149 (MQ=255)                                                                        gAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATc                                                                                    >  3:257082/1‑141 (MQ=255)                                                                        gAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATc                                                                                    <  4:257082/141‑1 (MQ=255)                                                                              ccccATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCaa                                                                        >  2:301366/1‑147 (MQ=255)                                                                                      tctTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTTGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTc                                                                                                       <  7:6318/109‑1 (MQ=255)                                                                                      tctTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTc                                                                                                       >  8:6318/1‑109 (MQ=255)                                                                                      tctTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAg                                                               >  6:304097/1‑148 (MQ=255)                                                                                      tctTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAg                                                               >  4:148166/1‑148 (MQ=255)                                                                                        ttgttgCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGaacaggtcagccatgtgtggctgctgttcctgttccaccaggcc                                                                                                            <  4:234783‑M1/104‑45 (MQ=255)                                                                                        ttgttgCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGaacaggtcagccatgtgtggctgctgttcctgttccaccaggcc                                                                                                            >  3:234783‑M1/1‑60 (MQ=255)                                                                                          gttgCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTc                                                                  <  2:193453/141‑1 (MQ=255)                                                                                          gttgCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTc                                                                  >  1:193453/1‑141 (MQ=255)                                                                                           ttgCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGc                                                          >  2:278588/1‑148 (MQ=255)                                                                                                 cccAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCt                                                                                         >  7:9283/1‑111 (MQ=255)                                                                                                 cccAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCt                                                                                         <  8:9283/111‑1 (MQ=255)                                                                                                        gcgGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGgc                                            <  8:257287/149‑1 (MQ=255)                                                                                                        gcgGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGgc                                            >  2:169344/1‑149 (MQ=255)                                                                                                           gAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGgcgc                                          >  4:153813/1‑148 (MQ=255)                                                                                                                cGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGTGGGGAAGGCCATCGACCTGCGTCACCTTGATAGAACGGCGGCAACAGTTAGAGTACGCCACAGGCGGCAGGCGCCAg                                       >  1:279843/1‑149 (MQ=255)                                                                                                                 gCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACagcagc                                                                                                                                      <  7:135799/53‑1 (MQ=255)                                                                                                                 gCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACagcagc                                                                                                                                      >  8:135799/1‑53 (MQ=255)                                                                                                                  cACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCg                                  <  2:198457/149‑1 (MQ=255)                                                                                                                     tttCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCcaca                                                      <  8:248684/126‑1 (MQ=255)                                                                                                                         aGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGgcg                           <  4:265330/149‑1 (MQ=255)                                                                                                                           gcgcGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGcgcg                         >  8:52922/1‑149 (MQ=255)                                                                                                                              cgGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGaa                      <  1:169344/149‑1 (MQ=255)                                                                                                                              cgGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGaa                      <  6:190928/149‑1 (MQ=255)                                                                                                                                       ctccAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACt             >  8:318177/1‑149 (MQ=255)                                                                                                                                        tccAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACtt            >  2:1783/1‑149 (MQ=255)                                                                                                                                        tccAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACtt            >  5:245801/1‑149 (MQ=255)                                                                                                                                         ccAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaagagcatgggggtgttcgccacccgcgccacccaccggccc             <  1:83980‑M2/148‑101 (MQ=255)                                                                                                                                          cAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACtttt          <  1:301366/149‑1 (MQ=255)                                                                                                                                          cAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACtttt          >  5:339273/1‑149 (MQ=255)                                                                                                                                           aGGGCCTGGaacaggtcagccatgtgtggctgctgttcctgttccaccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaagagcatgggggtgttcgccacccgcgccacccaccggcccaac            <  7:292397‑M1/149‑141 (MQ=255)                                                                                                                                            gggCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCTGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTcc        <  2:323364/149‑1 (MQ=255)                                                                                                                                             ggCCTGGaacaggtcagccatgtgtggctgctgttcctgttccaccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaagagcatgggggtgttcgccccccgcgccacccaccggcccaacgg          >  3:184082‑M1/1‑7 (MQ=255)                                                                                                                                             ggCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaa                                                     >  3:234783‑M2/1‑44 (MQ=255)                                                                                                                                             ggCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑Tccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaa                                                     <  4:234783‑M2/104‑61 (MQ=255)                                                                                                                                             ggCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTCCt       >  2:57115/1‑149 (MQ=255)                                                                                                                                             ggCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTCCt       <  1:1783/149‑1 (MQ=255)                                                                                                                                                  ggaacaggtcagccatgtgtggctgctgttcctgttccaccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaagagcatgggggtgttcgccacccgcgccacccaccggcccaacggcatcg     >  6:248006‑M1/1‑2 (MQ=255)                                                                                                                                                   gtggAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTCCTTGaaa  <  1:278588/148‑1 (MQ=255)                                                                                                                                                   gaacaggtcagccatgtgtggctgctgttcctgttccaccaggccctggaggaaaagccgcgcctgaaagtgcggcctccgcgtctgggcggcaacaagagcatgggggtgttcgccacccgcgccacccaccggcccaacggcatcgg    >  5:125182‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                       CCGGGCTCCACGCCCTCCAGGCGTACCACCGACTGGCCGATGCCGTTGGGCCGGTGGGTGGCGCGGGTGGCGAACACCCCCATGCTCTTGTTGCCGCCCAGACGCGGAGGCCGCACTTTCAGGCGCGGCTTTTCCTCCAGGGCCTGGTGGAACAGGAACAGCAGCCACACATGGCTGACCTGT‑‑TCCAGGCCCTCGACC‑GCGTCACCTTGATCGAACGGCGGCAACAGTTCGAGTACGCCACAGGCGGCAGGCGCCAGTTGCGGCTGGCGCGGAATGGCGAACTTTTCCTTGAAA  >  NC_002947/1365137‑1365430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.