New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1750108 =59 (1.090)4 (0.080) 4/248 NT 6.0% coding (128/852 nt) PP_1549 Cro/CI family transcriptional regulator
?NC_002947 1750155 = 69 (1.340)coding (81/852 nt) PP_1549 Cro/CI family transcriptional regulator

CGGAGTGCTTACCTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTT  >  NC_002947/1749960‑1750254
                                                                                                                                                    |                                                                                                                                                  
aggcattcaagcatgcttgcatattcaaaacaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcg                                                                                                                                                    <  4:45895‑M1/1‑1 (MQ=255)
 ggAGTGCTTACCTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGc                                                                                                                                                   >  1:325476/1‑149 (MQ=255)
    gTGCTTACCTCTTTTGTGTGCACTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCTTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGaa                                                                                                                                                <  6:95521/149‑1 (MQ=255)
     ttcaagcatgcttgcatattcaaaacaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcGCGAAc                                                                                                                                               >  1:344503‑M1/144‑149 (MQ=255)
       cTTACCTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTACCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCa                                                                                                                                             >  7:3738/1‑149 (MQ=255)
          aCCTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTg                                                                                                                                          >  6:113767/1‑149 (MQ=255)
           ccTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTGCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTgg                                                                                                                                         <  5:69461/149‑1 (MQ=255)
           ccTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGCCTAGCGCGACGAGGTTTTCGTTCTTGATGATCTCGGTATCTCCGGCGAACCACTgg                                                                                                                                         >  6:69461/1‑149 (MQ=255)
               ttttGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGa                                                                                                                                     >  1:118105/1‑149 (MQ=255)
                ttgcatattcaaaacaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcGCGAACCACTGGCGGa                                                                                                                                     <  1:64689‑M1/16‑1 (MQ=255)
                    tttgCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGGTTTCGTTCGTGATGTTCTCGGTATATCCGGCGAACCACTGGCGGACAGcc                                                                                                                                >  7:124655/1‑149 (MQ=255)
                     tttctctTGCTTAGCGGCCCCTTTGGGTGGTGTCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCTGACAGcc                                                                                                                                <  7:243004/145‑1 (MQ=255)
                     ttgCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCCTAGCCCTGGGCTAGCGCGACGAGGGTTTGGTTCTTGATGTTGAAGGTATCTCCGGCGAACCACTGGCGGACAGCCt                                                                                                                               >  2:131897/1‑149 (MQ=255)
                         tctTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCgg                                                                                                                                                    >  1:232575/1‑124 (MQ=255)
                         tctTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCgg                                                                                                                                                    <  2:232575/124‑1 (MQ=255)
                                  gCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCAAACCACTGGCGGACAGCCTCATAGCTGATTcc                                                                                                                  >  4:282196/1‑149 (MQ=255)
                                        ccTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGgt                                                                                                            >  4:191401/1‑149 (MQ=255)
                                        ccTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGGTCTTGATGTTGTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGgt                                                                                                            >  8:98447/1‑149 (MQ=255)
                                          tttGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGgtgt                                                                                                          >  6:143143/1‑149 (MQ=255)
                                             gCGTGGTGGCTCACCCTTCCCAGACAAAAGGCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTc                                                                                                        <  7:185096/148‑1 (MQ=255)
                                              cGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTcgc                                                                                                      <  6:176235/149‑1 (MQ=255)
                                               gtggtgGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCAt                                                                                                                            <  7:188050/126‑1 (MQ=255)
                                               gtggtgGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCAt                                                                                                                            >  8:188050/1‑126 (MQ=255)
                                                tggtggCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGa                                                                                                    >  5:176671/1‑149 (MQ=255)
                                                tggtggCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGa                                                                                                    <  2:325476/149‑1 (MQ=255)
                                                      gtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTc                                                                                                >  2:64689‑M1/95‑147 (MQ=255)
                                                       tCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCACATAGCTGATTCCGCAGGTGTTCGCAATGTcaaa                                                                                             >  7:26769/1‑146 (MQ=255)
                                                         aCCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGtt                                                                                           <  2:118105/149‑1 (MQ=255)
                                                          cccTTCCCAGACAAAAGCCAATCAACAGTCGTTTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGttt                                                                                          <  8:3738/149‑1 (MQ=255)
                                                           ccTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAg                                                                                                              >  8:39770/1‑128 (MQ=255)
                                                           ccTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAg                                                                                                              <  7:39770/128‑1 (MQ=255)
                                                            cTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCAAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGa                                                                                        <  3:282196/149‑1 (MQ=255)
                                                               cccAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGAAAt                                                                                     >  4:90200/1‑149 (MQ=255)
                                                                ccAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGAc                                                                                                                                    <  6:127521/101‑1 (MQ=255)
                                                                ccAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGAc                                                                                                                                    >  5:127521/1‑101 (MQ=255)
                                                                 cAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTg                                                                                   >  6:205330/1‑149 (MQ=255)
                                                                 cAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTg                                                                                   >  8:20105/1‑149 (MQ=255)
                                                                   gACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCa                                                                                                               <  4:87328/119‑1 (MQ=255)
                                                                   gACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCa                                                                                                               >  3:87328/1‑119 (MQ=255)
                                                                      aaaaGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGATCCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGAGGACGCGTTTGACATTGCGAAc                                                                              >  8:301511/1‑149 (MQ=255)
                                                                       aaaGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACAtt                                                                                    >  7:168339/1‑142 (MQ=255)
                                                                       aaaGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACAtt                                                                                    <  8:168339/142‑1 (MQ=255)
                                                                         aGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGcc                                                                           >  6:92281/1‑149 (MQ=255)
                                                                              aTCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCGGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACt                                                                      >  2:128974/1‑149 (MQ=255)
                                                                              aTCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACt                                                                      <  3:191401/149‑1 (MQ=255)
                                                                                    aGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGc                                                                >  5:34603/1‑149 (MQ=255)
                                                                                        gtgtcgtAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACg                                                            >  3:100087/1‑149 (MQ=255)
                                                                                         tgtcgtAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACgg                                                           <  5:113767/149‑1 (MQ=255)
                                                                                            aactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGAt                                                                                                   <  6:2163‑M1/50‑1 (MQ=255)
                                                                                            aactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGAt                                                                                                   >  5:2163‑M1/57‑106 (MQ=255)
                                                                                               aGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAg                                                      >  7:280826/1‑148 (MQ=255)
                                                                                                gCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGa                                                    <  1:122946/149‑1 (MQ=255)
                                                                                                  ccTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGAc                                                   >  1:131467/1‑148 (MQ=255)
                                                                                                     cGGCTAGCGCGACGAGGTTTTCGTACTTGATGTTCTCGGTATCTAACGCGAACCACTGGCGGACACCCTCATAGCTGATTCCGCATCTGTTCGCGATGTAGCGTTTGACATTGCGAACGCCCAACTGAGCGCGACGGCTCAGGACGAGt                                               >  8:245070/1‑149 (MQ=255)
                                                                                                           gcgcGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCTATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTgg                                           <  7:245070/147‑1 (MQ=255)
                                                                                                           gcgcGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTg                                         <  2:241130/149‑1 (MQ=255)
                                                                                                                 cgaGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGa                                   <  5:92281/149‑1 (MQ=255)
                                                                                                                    ggTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGAt                                  >  4:132544/1‑147 (MQ=255)
                                                                                                                      ttttCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCag                               >  3:110617/1‑148 (MQ=255)
                                                                                                                       tttCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCag                               >  7:65177/1‑147 (MQ=255)
                                                                                                                        ttCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCagtag                            >  1:44511/1‑149 (MQ=255)
                                                                                                                           gTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGttt                         <  5:205330/149‑1 (MQ=255)
                                                                                                                                 gATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGAt                                  >  7:147851/1‑134 (MQ=255)
                                                                                                                                 gATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGAt                                  <  8:147851/134‑1 (MQ=255)
                                                                                                                                       ctcGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCaa             >  5:131618/1‑149 (MQ=255)
                                                                                                                                          ggTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATc           >  1:37886/1‑148 (MQ=255)
                                                                                                                                           gTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTCACATTGCGAACGCCCAACTGTGCGCGACCGGACAGGACCAGTTTGGAGATTCGATCAGTAGTTTTAATTCGCGCAATCt          >  4:91452/1‑148 (MQ=255)
                                                                                                                                            tATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTAc        <  5:143143/149‑1 (MQ=255)
                                                                                                                                              tctcCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTAc        >  4:281756/1‑147 (MQ=255)
                                                                                                                                                tcCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAgg    >  2:216288/1‑149 (MQ=255)
                                                                                                                                                tcCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAgg    >  1:177312/1‑149 (MQ=255)
                                                                                                                                                  cGGCGAACCACTGGCGGACAGCCTCATTGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATc                                 <  4:140459/118‑1 (MQ=255)
                                                                                                                                                  cGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATc                                 >  3:140459/1‑118 (MQ=255)
                                                                                                                                                  cGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAgg    <  4:100087/147‑1 (MQ=255)
                                                                                                                                                  cGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAg     <  6:131618/146‑1 (MQ=255)
                                                                                                                                                  cGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGtt  >  3:45895/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGGAGTGCTTACCTCTTTTGTTTGCTCTTGCTTAGCGGCCCCTTTGCGTGGTGGCTCACCCTTCCCAGACAAAAGCCAATCAACAGTCGTGTCGTAGCCCTCGGCTAGCGCGACGAGGTTTTCGTTCTTGATGTTCTCGGTATCTCCGGCGAACCACTGGCGGACAGCCTCATAGCTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTT  >  NC_002947/1749960‑1750254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.