New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1844134 =4 (0.070)56 (1.080) 50/250 NT 67.5% coding (660/2754 nt) gacS sensor protein GacS
?NC_002947 = 2179376 50 (0.960)intergenic (+175/+93) PP_1931/PP_5486 hypothetical protein/hypothetical protein

Only 100 of 136 total aligned reads displayed.

TGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTG  >  NC_002947/1843986‑1844278
                                                                                                                                                    |                                                                                                                                                
tGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATG                                                                                                                                                  >  5:322307‑M1/1‑149 (MQ=255)
tGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATG                                                                                                                                                  <  7:187731‑M1/149‑1 (MQ=255)
  cccaaaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGt                                                                                                                                                <  3:94733‑M1/3‑1 (MQ=255)
     aaaagacctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgcgctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCgg                                                                                                                                             <  8:77864‑M1/6‑1 (MQ=255)
          acctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGc                                                                                                                                        >  4:99408‑M1/139‑149 (MQ=255)
          acctcaagaacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGc                                                                                                                                        <  7:448‑M1/11‑1 (MQ=255)
                agaacgactcacatcgccacatgcgccccatcacggctatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccatgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGttctt                                                                                                                                  >  3:276662‑M1/133‑149 (MQ=255)
                 gTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaa                                                                                                                                 <  2:321043‑M1/149‑15 (MQ=255)
                  aacgactcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCg                                                                                                                                >  8:313134‑M1/131‑149 (MQ=255)
                    tCCAGGTTCTGGCGCACGTCTTCGGTGGACTCGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCAGTGGGACAGTTCCTCCAGCTCATGGCTTGCCATGGTCGGCAGGCGTTCTTagag                                                                                                                              >  5:287102/1‑149 (MQ=255)
                       ctcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTg                                                                                                                           >  8:448‑M1/126‑149 (MQ=255)
                       aGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTATCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgccc                                                                                                                           >  5:140186‑M1/1‑129 (MQ=255)
                        tcacatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTgg                                                                                                                          <  7:78474‑M1/25‑1 (MQ=255)
                          acatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTgg                                                                                                                          >  8:78474‑M1/123‑147 (MQ=255)
                          acatcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGc                                                                                                                         >  1:156616‑M1/123‑148 (MQ=255)
                            atcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGt                                                                                                                      <  8:67210‑M1/29‑1 (MQ=255)
                            atcgccacatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGt                                                                                                                      <  5:211016‑M1/29‑1 (MQ=255)
                             tGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtt                                                                                                                     >  4:212142‑M1/1‑123 (MQ=255)
                               gcgcACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgt                                                                                                                   >  8:185534‑M1/1‑121 (MQ=255)
                               gcgcACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttg                                                                                                                    >  4:329488‑M1/1‑121 (MQ=255)
                               gcgcACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtt                                                                                                                     <  7:56068‑M1/147‑27 (MQ=255)
                                  acatgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCtt                                                                                                                  <  8:161918‑M1/33‑1 (MQ=255)
                                   catgcgccccagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAg                                                                                                               <  3:72062‑M1/36‑1 (MQ=255)
                                        ttCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATG                                                                                                                                                  >  1:52479‑M1/1‑109 (MQ=255)
                                           ggTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctg                                                                                                        <  2:155555‑M1/148‑40 (MQ=255)
                                            cagcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGAc                                                                                                      <  7:68968‑M1/45‑1 (MQ=255)
                                             agcacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGAcc                                                                                                     <  2:17014‑M1/46‑1 (MQ=255)
                                               cacggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACcgc                                                                                                   >  2:303287‑M1/102‑149 (MQ=255)
                                                 cggcgatttgagctaaaccacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGt                                                                                                 >  6:211016‑M1/100‑149 (MQ=255)
                                                     tCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgac                                                                                             >  1:112481‑M1/1‑99 (MQ=255)
                                                       gATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccg                                                                                           >  8:300500‑M1/1‑97 (MQ=255)
                                                       gATGCTGTGTTGCAGTTCATCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgc                                                                                                                             <  1:284358‑M1/115‑19 (MQ=255)
                                                           cTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgg                                                                                        <  8:131523‑M1/148‑56 (MQ=255)
                                                            tgtgTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggg                                                                                       >  1:80354‑M1/1‑92 (MQ=255)
                                                             gtgtTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCTTGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgggga                                                                                     <  4:4177‑M1/149‑59 (MQ=255)
                                                             gtgtTGCAGTTCTTCGTGGGCATTCTGCAGGGTATCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtgggga                                                                                     <  6:140186‑M1/149‑59 (MQ=255)
                                                                 accacgcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGAt                                                                                 >  7:161918‑M1/84‑149 (MQ=255)
                                                                   cAGTTCTTCGTGGGCTTTCTGCAGGGTTGCGGCCTTGGGGTTGTTGCCGTGGGCCAGTTCGTCGAGCTCATGGCTGCCGATGGTGGGCAGGCGTTCTTCGAGGTGGCCGTCGTTGAGCTGATTGAGCGCGTGCTTGATGCGTTCGATgg                                                                               <  6:287102/149‑1 (MQ=255)
                                                                   aagTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATCAGGTTGATCCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCACATGGTCcagactgggagaaaacgcccgcggttgtcaaaccatctggtcgtcgtgaccgtggcgacaatca                                                                               >  6:331190‑M1/2‑85 (MQ=255)
                                                                      ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatga                                                                            <  2:80354‑M1/149‑68 (MQ=255)
                                                                      ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctg                                                                                                        <  1:323137‑M1/121‑40 (MQ=255)
                                                                      ttcttcGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctg                                                                                                        >  2:323137‑M1/1‑82 (MQ=255)
                                                                      gcaatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGt                                                                            <  5:175267‑M1/71‑1 (MQ=255)
                                                                      gcaatttcttgccagtttggcaagcctctctagatccctgagcccttcaactcatttcgcgtgatttcacacagcctgCGTAGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCTCATGCTTGATGCGTTCGATGGGGt                                                                            <  6:292974‑M1/71‑1 (MQ=255)
                                                                        aatttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCg                                                                          <  5:173285‑M1/73‑1 (MQ=255)
                                                                          tttcttgccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGt                                                                                                                            >  1:245938‑M1/75‑97 (MQ=255)
                                                                           cGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaag                                                                          <  6:54003‑M1/146‑70 (MQ=255)
                                                                            gTGGGCATTCTGCAGGGTTGCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcga                                                                       <  6:101374‑M1/148‑73 (MQ=255)
                                                                                gcctgtttggcaagcctctctagatgcctgcgcccttctacgcatttcgcgtgttttcacacatcctgGGTCGGCAGGCGTTCTTCGAGGTGGCGGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGAt                                                                     >  5:292974‑M1/69‑146 (MQ=255)
                                                                                gccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATg                                                                    >  7:137305‑M1/69‑147 (MQ=255)
                                                                                 ccagtttggcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTg                                                                 <  4:135225‑M1/82‑1 (MQ=255)
                                                                                 cATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatc                                                                 <  5:331190‑M1/149‑79 (MQ=255)
                                                                                       gCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggt                                                           >  1:27085‑M1/1‑65 (MQ=255)
                                                                                       gCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggt                                                           >  6:176753‑M1/1‑65 (MQ=255)
                                                                                        cAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtg                                                          <  2:247583‑M1/149‑86 (MQ=255)
                                                                                         gcaagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCa                                                          >  6:173285‑M1/60‑148 (MQ=255)
                                                                                           aagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATg                                                        <  4:158763‑M1/91‑1 (MQ=255)
                                                                                           aagcctctctagatccctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATg                                                        >  3:158763‑M1/58‑148 (MQ=255)
                                                                                             gcctctctagatccctgcgcccttaaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATgcg                                                      <  7:271274‑M1/93‑1 (MQ=255)
                                                                                               cgatgtatgcggtTGATGCCGTGGGCCAGTTCGTCCTGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcg                                                   <  1:201830‑M1/143‑93 (MQ=255)
                                                                                                  gCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaac                                                <  3:329488‑M1/149‑96 (MQ=255)
                                                                                                      tGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggcttg                                                   >  2:201830‑M1/1‑50 (MQ=255)
                                                                                                        tccctgctcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAg                                          <  4:93494‑M1/105‑1 (MQ=255)
                                                                                                          cctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGc                                        >  8:68968‑M1/43‑149 (MQ=255)
                                                                                                           ctgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGcc                                       <  4:299532‑M1/108‑1 (MQ=255)
                                                                                                            tgcgcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCg                                      <  6:224950‑M1/109‑1 (MQ=255)
                                                                                                             gATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggac                                                                                    >  4:162559‑M1/1‑43 (MQ=255)
                                                                                                             gATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggac                                                                                    <  3:162559‑M1/102‑60 (MQ=255)
                                                                                                              aTGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacat                                     <  6:298701‑M1/148‑107 (MQ=255)
                                                                                                              aTGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaag                                                             >  7:77282‑M1/1‑42 (MQ=255)
                                                                                                               tGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattg                                   >  2:71295‑M1/1‑41 (MQ=255)
                                                                                                               gcccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCGAACAGGCCGCt                                    <  2:318948‑M1/111‑1 (MQ=255)
                                                                                                                gCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtggccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgc                                  >  1:116537‑M1/1‑40 (MQ=255)
                                                                                                                gCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgc                                  >  2:146429‑M1/1‑40 (MQ=255)
                                                                                                                cccttccacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCGTGAGCTGATTGACCGCGTGCTTGATGCGGTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGa                                  >  3:45264‑M1/37‑149 (MQ=255)
                                                                                                                cccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGa                                  >  3:275145‑M1/37‑149 (MQ=255)
                                                                                                                cccttcaacgcatttcgcgtgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGa                                  >  4:72062‑M1/37‑149 (MQ=255)
                                                                                                                  cGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctg                                >  3:17612‑M1/1‑38 (MQ=255)
                                                                                                                         cAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttaca                                      >  4:142688‑M1/1‑31 (MQ=255)
                                                                                                                         cAGTTCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttaca                                      <  3:142688‑M1/136‑106 (MQ=255)
                                                                                                                         cAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCcagg                          >  5:90550/1‑148 (MQ=255)
                                                                                                                            ttCGTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcc                      >  8:167654‑M1/1‑28 (MQ=255)
                                                                                                                               gTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctg                    >  8:70441‑M1/1‑25 (MQ=255)
                                                                                                                               gTCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtcgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctgg                   >  2:3726‑M1/1‑25 (MQ=255)
                                                                                                                                tCCAGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctgga                  >  1:176685‑M1/1‑24 (MQ=255)
                                                                                                                                   tgttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATCCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGAt               <  5:32521‑M1/132‑1 (MQ=255)
                                                                                                                                   aGCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacga               <  7:70441‑M1/149‑129 (MQ=255)
                                                                                                                                    gCTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacga               >  7:58115‑M1/1‑20 (MQ=255)
                                                                                                                                     ttttcacacagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGAt               <  5:286729‑M1/132‑1 (MQ=255)
                                                                                                                                     cTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttagattgctgccggagtgcctggacgact             <  2:27085‑M1/149‑131 (MQ=255)
                                                                                                                                     cTCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggtagtctaaccatctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgac              >  5:174327‑M1/1‑19 (MQ=255)
                                                                                                                                      tttcacacagcctgGGTCGGCAGGCGTTCTACGAGGTGGCCGTCCTTGAGCTGATTGACAGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAg            <  7:51443‑M1/135‑1 (MQ=255)
                                                                                                                                      tCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaat                                                                                 >  2:259675‑M1/1‑18 (MQ=255)
                                                                                                                                      tCATGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaat                                                                                 <  1:259675‑M1/80‑63 (MQ=255)
                                                                                                                                        aTGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacg          <  2:176685‑M1/149‑134 (MQ=255)
                                                                                                                                        aTGGCTGCCCATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggacgactacg          <  7:167654‑M1/149‑134 (MQ=255)
                                                                                                                                             cagcctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAgg     >  5:224950‑M1/8‑149 (MQ=255)
                                                                                                                                                cctgGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTg  <  5:212852‑M1/145‑1 (MQ=255)
                                                                                                                                                ccATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggac                 >  5:153249‑M1/1‑8 (MQ=255)
                                                                                                                                                ccATGGTCcagactgtgtgaaaacgcccgcggttgtctaaccttctggtcgtcgtgaccgtggggacaatcatgaagcgattcatcgaaggtgaggctcgaacgcaggttacattgctgccggagtgcctggac                 <  6:153249‑M1/134‑127 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TGTTCTGGATTTCGATGGTTTCCAGGTTCTGGCGCACGTCTTCGGTGGCCTGGTCGATGCTGTGTTGCAGTTCTTCGTGGGCATTCTGCAGGGTTTCGGCCATGCGGTTGATGCCGTGGGCCAGTTCGTCCAGCTCATGGCTGCCCATGGTCGGCAGGCGTTCTTCGAGGTGGCCGTCCTTGAGCTGATTGACCGCGTGCTTGATGCGTTCGATGGGGTCGTTGATGGTGCGGCTCATGCGCAGCGCCAACAGGCCGCTGAGTGCCAGGCAGGCGAGGATCAGCAACAGGCTG  >  NC_002947/1843986‑1844278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.