New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1852117 =	46 (0.850)	3 (0.060)	3/252	NT	7.4%	coding (1203/2241 nt)	relA	ATP:GTP 3'‑pyrophosphotransferase
	?	NC_002947	1852191 =	31 (0.590)					coding (1277/2241 nt)	relA	ATP:GTP 3'‑pyrophosphotransferase

CGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTACCGCGTGCACACCGAGATCGGCCAC  >  NC_002947/1851970‑1852255                                                                                                                                                    |                                                                                                                                           tgatgatctccacctgctcgccagtctgcaggctgtagttcagcggcacgatacggccgttgatcttcgcgccgcggcagttgtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgatg                                                                                                                                           <  2:45910‑M1/2‑1 (MQ=255)        cACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGtggcctggc                                                                                                                                    >  1:219355/1‑149 (MQ=255)            acctgctcgccagtctgcaggctgtagttcagcggcacgagacggccgttgatcttcgcgccgcggcagttgtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgatggc                                                                                                                                         <  3:188401‑M1/4‑1 (MQ=255)            acctgctcgccagtctgcaggctgtagttcagcggcacgacacggccgttgatcttcgcgccgcggcagttgtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgatggc                                                                                                                                         >  4:188401‑M1/137‑140 (MQ=255)                 gCCGAACTTGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGtt                                                                                                                           <  6:146961/149‑1 (MQ=255)                    gAACTTGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCg                                                                                                                        <  7:48574/149‑1 (MQ=255)                        ttGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTc                                                                                                                    >  6:142855/1‑149 (MQ=255)                                  cgcCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAg                                                                                                           <  1:168067/148‑1 (MQ=255)                                   gcCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGc                                                                                                          <  5:19679/148‑1 (MQ=255)                                   gcCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGc                                                                                                          >  6:19679/1‑148 (MQ=255)                                           gcgcTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCggg                                                                                                 >  5:279991/1‑149 (MQ=255)                                              cTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGttt                                                                                              <  6:279991/149‑1 (MQ=255)                                               tACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTa                                                                                             >  4:240788/1‑149 (MQ=255)                                                aCAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTAt                                                                                            >  1:7011/1‑149 (MQ=255)                                                 cAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGCCCGAGCAGGTGCGGGTCGACATCTAGCCTGACCGGCTTTAtg                                                                                           >  7:318141/1‑149 (MQ=255)                                                  aaGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTAtgt                                                                                          <  2:219355/149‑1 (MQ=255)                                                        aCCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGc                                                                                                                         >  8:310139/1‑112 (MQ=255)                                                        aCCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGc                                                                                                                         <  7:310139/112‑1 (MQ=255)                                                           gACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTAtgt                                                                                          <  1:176816/140‑1 (MQ=255)                                                           gACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTAtgt                                                                                          >  2:176816/1‑140 (MQ=255)                                                            aCGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCAccccc                                                                                >  2:76987/1‑149 (MQ=255)                                                              gTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGa                                                                              >  3:162825/1‑149 (MQ=255)                                                               tCAAGCCCATCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGAc                                                                             <  6:189677/149‑1 (MQ=255)                                                               tCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGAc                                                                             >  4:103584/1‑149 (MQ=255)                                                                cAAGCCCAGCTCCAAGCACTTCGAAGTAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCTCGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGGGGGTc                                                                                                                    <  4:156291/109‑1 (MQ=255)                                                                cAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCACGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGAGCCCTGGCCGAGCAGTTGCGGGTc                                                                                                                    >  3:156291/1‑109 (MQ=255)                                                                    cccAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAg                                                                                                                             <  2:34991/96‑1 (MQ=255)                                                                    cccAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAg                                                                                                                             >  1:34991/1‑96 (MQ=255)                                                                    cccAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCggg                                                                                                 >  6:130858/1‑124 (MQ=255)                                                                    cccAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCggg                                                                                                 <  5:130858/124‑1 (MQ=255)                                                                          gcggcagttgtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgaTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCAt                                                                  >  8:167180‑M1/75‑149 (MQ=255)                                                                            cAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCAt                                                                  <  2:330086/147‑1 (MQ=255)                                                                             aaCCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGa                                                               <  8:3742/149‑1 (MQ=255)                                                                              aCCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGAc                                                              <  5:142855/149‑1 (MQ=255)                                                                              aCCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGAc                                                              <  3:103584/149‑1 (MQ=255)                                                                               ccACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGCCCTCGGTGGCCTGGCCGCGCAGTGGCGGTTCGCCATCGAGCCTGACCGGGTTGATGTGTTCAACCCCGACGGCCACGCCATCGccc                                                             >  6:345482/1‑149 (MQ=255)                                                                                   gtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgaTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACg                                                                      >  1:60328‑M1/66‑136 (MQ=255)                                                                                   gtggccgatctcggtgtgcacgcggtaggcgaagtccaatggcgtggcgcctttgggcaggtcgaTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACg                                                                      <  2:60328‑M1/71‑1 (MQ=255)                                                                                      gaagaaAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGATCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGAc                                                              <  7:170429/141‑1 (MQ=255)                                                                                      gaagaaAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGATCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCaa                                                      <  1:76987/149‑1 (MQ=255)                                                                                      gaagaaAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATAGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATAGAGCCTGACCGGGTTTATGTGTTCACACCCGACGGCCACGCCATCGAc                                                              >  8:170429/1‑141 (MQ=255)                                                                                               aTTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGcgccac                                             <  2:70162/149‑1 (MQ=255)                                                                                                       gTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCAtt                                       <  1:100176/147‑1 (MQ=255)                                                                                                       gTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTgg                                     <  2:7011/149‑1 (MQ=255)                                                                                                       gTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTg                                      <  3:240788/148‑1 (MQ=255)                                                                                                           cGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACtt                                 >  3:271973/1‑149 (MQ=255)                                                                                                             tCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCg                               <  4:271973/149‑1 (MQ=255)                                                                                                                ggTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGcc                             >  3:255489/1‑148 (MQ=255)                                                                                                                  tGCTGGAGTGGCAGGATGTTCTTGGCGACATCGGTGGCCTTGCCTAGCAGTTGCGGGGCGCCATCGAGCGTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTAc                          <  8:318141/149‑1 (MQ=255)                                                                                                                     tGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTACcgc                       <  4:255489/149‑1 (MQ=255)                                                                                                                            gCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTACCGCGTGcaca                <  4:162825/149‑1 (MQ=255)                                                                                                                                           cGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTACCGCGTGCACACCGAGATCGGCcac  >  5:198619/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                           CGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGCGCTACAAGGGCACCGACGTCAAGCCCAGCTCCAACCACTACGAAGAAAAGATTTCCTGGTTGCGTCAGGTGCTGGAGTGGCACGAAGAGCTGGGCGACATCGGTGGCCTGGCCGAGCAGTTGCGGGTCGACATCGAGCCTGACCGGGTTTATGTGTTCACCCCCGACGGCCACGCCATCGACCTGCCCAAAGGCGCCACGCCATTGGACTTCGCCTACCGCGTGCACACCGAGATCGGCCAC  >  NC_002947/1851970‑1852255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.