New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2301496 =20 (0.370)7 (0.150) 7/232 NT 20.6% intergenic (‑140/‑191) sbcD/PP_5497 exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
?NC_002947 2301581 = 36 (0.750)intergenic (‑225/‑106) sbcD/PP_5497 exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

GACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGT  >  NC_002947/2301350‑2301643
                                                                                                                                                  |                                                                                                                                                    
atcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCtgt                                                                                                                                                    >  7:99822‑M1/104‑149 (MQ=255)
agtacccgtatgctgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccatgt                                                                                                                                                    >  4:160531‑M1/147‑149 (MQ=255)
 tcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCtgtg                                                                                                                                                   >  2:202396‑M1/103‑149 (MQ=255)
   acccgtatgctgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTgg                                                                                                                                                  >  8:229414‑M1/144‑148 (MQ=255)
     tcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAg                                                                                                                                               >  4:51635‑M1/99‑149 (MQ=255)
     tcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAg                                                                                                                                               <  2:227281‑M1/51‑1 (MQ=255)
     ccgtatgctgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAg                                                                                                                                               <  4:105644‑M1/8‑1 (MQ=255)
     ccgtatgctgtatagacctgtgccaaggtcgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAg                                                                                                                                               <  3:248460‑M1/8‑1 (MQ=255)
                  ttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                  <  7:164946‑M1/64‑1 (MQ=255)
                  ttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcg                                                                                                                                   >  6:68808‑M1/86‑148 (MQ=255)
                   tctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcgc                                                                                                                                  >  1:227281‑M1/85‑148 (MQ=255)
                      agatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCcgcg                                                                                                                                 <  3:6575‑M1/65‑1 (MQ=255)
                       gatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaa                                                                                                                               >  2:42214‑M1/81‑147 (MQ=255)
                        atctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                            >  7:90461‑M1/80‑149 (MQ=255)
                        atctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaagaa                                                                                                                            <  3:202494‑M1/70‑1 (MQ=255)
                          ctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATc                                                                                                                          <  5:248449‑M1/72‑1 (MQ=255)
                             gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAAt                                                                                                                           >  8:164946‑M1/75‑145 (MQ=255)
                             gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCa                                                                                                                        >  6:248449‑M1/75‑148 (MQ=255)
                               tgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAcg                                                                                                                     >  4:202494‑M1/73‑149 (MQ=255)
                                  cgccatcgcctagcctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCgg                                                                                                                  <  4:35055‑M1/37‑1 (MQ=255)
                                    gtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaag                                                                                                                              >  6:247024‑M1/68‑135 (MQ=255)
                                    gtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCgaag                                                                                                                              <  5:247024‑M1/68‑1 (MQ=255)
                                    gtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTg                                                                                                                <  3:233669‑M1/82‑1 (MQ=255)
                                       cagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCAt                                                                                                             >  1:273616‑M1/65‑149 (MQ=255)
                                          atctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATgg                                                                                                           <  1:246550‑M1/87‑1 (MQ=255)
                                           tctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCa                                                                                                         <  6:351404‑M1/89‑1 (MQ=255)
                                             tgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCAcc                                                                                                       <  8:259582‑M1/91‑1 (MQ=255)
                                              gacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCg                                                                                                      <  3:127210‑M1/92‑1 (MQ=255)
                                               cctcatacaagtgagccagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGCGCCCGCGAAGAATCCAACGCGGTGCATGGCACCgg                                                                                                     <  2:4084‑M1/50‑1 (MQ=255)
                                                  tcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTg                                                                                                  <  3:218407‑M1/96‑1 (MQ=255)
                                                         catcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGgt                                                                                           >  6:72511‑M1/47‑149 (MQ=255)
                                                               gtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcgc                                                                                               >  7:136667‑M1/41‑139 (MQ=255)
                                                               gtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTgcgc                                                                                               <  8:136667‑M1/99‑1 (MQ=255)
                                                               cagttgtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTcgc                                                                                     >  3:35055‑M1/84‑149 (MQ=255)
                                                                    gtagtttgctcgaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGCGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgc                                                                                 >  1:4084‑M1/79‑148 (MQ=255)
                                                                     tgtgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgcgc                                                                               <  8:163056‑M1/115‑1 (MQ=255)
                                                                       tgcgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgcgc                                                                               >  4:218407‑M1/33‑147 (MQ=255)
                                                                       gtttgctagaacacaatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGgcgcgc                                                                             >  4:94270‑M1/76‑149 (MQ=255)
                                                                         cgacagcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGccc                                                                           >  7:163056‑M1/31‑149 (MQ=255)
                                                                              gcgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCTGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTcc                                                                     <  6:197021‑M1/124‑1 (MQ=255)
                                                                              gcgcagcccggaagggctcggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGAGGGCGCGCCCGCTcc                                                                     <  8:124805‑M1/124‑1 (MQ=255)
                                                                               cgcagcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTccc                                                                    >  4:6575‑M1/25‑149 (MQ=255)
                                                                                gccgcccggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCtcccc                                                                   <  1:264742‑M1/126‑2 (MQ=255)
                                                                                   gcccggaagggctgggtgatCTCTCATAGACCTGCGCATCCCTTACTGATTTCGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCGGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAt                                                                >  1:335748‑M1/21‑149 (MQ=255)
                                                                                     aatttttccgccgcaatcaacggggagacaacttacaaaaatgcctggcatgcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAAGGCGGTGCATGGCACGGGGTGCGCCGGTGTTCGCGGTCGCGCCCGCTccc                                                                    >  8:111598‑M1/62‑143 (MQ=255)
                                                                                     aatttttccgccgcaatcaacggcgagacaactgacaaaaatgccaggcaagcgtggtccaTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTccc                                                                    <  7:111598‑M1/82‑1 (MQ=255)
                                                                                      cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGa                                                             <  4:304580‑M1/132‑1 (MQ=255)
                                                                                      cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGa                                                             <  6:128955‑M1/132‑1 (MQ=255)
                                                                                      cggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGa                                                             <  4:309622‑M1/132‑1 (MQ=255)
                                                                                       ggaagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGAc                                                            <  3:56791‑M1/133‑1 (MQ=255)
                                                                                         aagggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCa                                                          >  7:259582‑M1/15‑149 (MQ=255)
                                                                                            ggctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACg                                                        <  6:165490‑M1/137‑1 (MQ=255)
                                                                                             gctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCt                                                      <  4:295741‑M1/139‑1 (MQ=255)
                                                                                              ctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCtt                                                     >  5:128955‑M1/10‑149 (MQ=255)
                                                                                                 ggtgatCTCTAATAGAACTGCGCATCACTTACTCATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGcc                                                  >  6:215257‑M1/7‑149 (MQ=255)
                                                                                                            aTAGAACTGCGCATCACTTCCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttt                                          <  1:165673/146‑1 (MQ=255)
                                                                                                            aTAGAACTGCGCATCACTTACTGCTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTg                                       >  5:185791/1‑149 (MQ=255)
                                                                                                            aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTg                                       >  8:234482/1‑149 (MQ=255)
                                                                                                             tAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                      <  5:351404/149‑1 (MQ=255)
                                                                                                             tAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                      <  2:88458/149‑1 (MQ=255)
                                                                                                             tAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                      <  4:233669/149‑1 (MQ=255)
                                                                                                               gcaCTGCGCATCACTTACTGAGTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCCACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCa                                    <  5:189300/147‑1 (MQ=255)
                                                                                                                   tGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTg                                >  6:137552/1‑149 (MQ=255)
                                                                                                                               aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCCACATGGACCACGCTTGCCTGGCAttttt                                        <  1:210285/130‑1 (MQ=255)
                                                                                                                               aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                        >  2:210285/1‑129 (MQ=255)
                                                                                                                               aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGtc                              <  2:72924/139‑1 (MQ=255)
                                                                                                                               aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGtc                              >  1:72924/1‑139 (MQ=255)
                                                                                                                                 agATTTCGCTGGGACCCTGTGGGAGCGGGCGTCCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGGCCGCTCCCACATGGACCTCGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                  <  4:56367/148‑1 (MQ=25)
                                                                                                                                   aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGGGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGAtt                  <  6:185791/147‑1 (MQ=255)
                                                                                                                                   aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                        >  7:320246/1‑125 (MQ=255)
                                                                                                                                   aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAttttt                                        <  8:320246/125‑1 (MQ=255)
                                                                                                                                      tAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcgg              <  3:295741/148‑1 (MQ=255)
                                                                                                                                       aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggcg            >  8:230218/1‑149 (MQ=255)
                                                                                                                                       aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGATCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggcg            >  5:251713/1‑149 (MQ=255)
                                                                                                                                        gCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTgcggcg            >  3:105644/1‑148 (MQ=255)
                                                                                                                                               cccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTccc                                                                    <  4:188774/85‑1 (MQ=255)
                                                                                                                                               cccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTccc                                                                    >  3:188774/1‑85 (MQ=255)
                                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtg   <  3:309622/149‑1 (MQ=255)
                                                                                                                                                ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtg   <  3:304580/149‑1 (MQ=255)
                                                                                                                                                 cTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATtgt  <  4:127210/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGTCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGT  >  NC_002947/2301350‑2301643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.