New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3820587 =	36 (0.670)	4 (0.080)	4/244	NT	10.7%	coding (678/966 nt)	endA	endonuclease I
	?	NC_002947	3820646 =	33 (0.650)					coding (737/966 nt)	endA	endonuclease I

TGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGGCGCCGTGCTTG  >  NC_002947/3820439‑3820735                                                                                                                                                     |                                                                                                                                                     acctggttgtagcccgggcagccgactgacaggtgatagacgtggctgttgcggttgccaagcacggcgccgaccgaaccggcgctggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacgccgct                                                                                                                                                      <  6:117713‑M1/1‑1 (MQ=255)  cctggttgtagcccgggcagccgactgacaggtgatagacgtggctgttgcggttgccaagcacggcgccgaccgaaccggcgctggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacgccgcTg                                                                                                                                                     >  2:225887‑M1/148‑149 (MQ=255)      gttgtagcccgggcagccgactgacaggtgatagacgtggctgttgcggttgccaagcacggcgccgaccgaaccggcgctggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacgccgcTGCCaa                                                                                                                                                 >  4:217089‑M1/144‑149 (MQ=255)           cacGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGt                                                                                                                                            >  5:231197/1‑149 (MQ=255)             cGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTc                                                                                                                                          <  3:73822/149‑1 (MQ=255)             cGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTc                                                                                                                                          <  1:96509/149‑1 (MQ=255)                          cGACCGCTAGAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTTCCGCGATCATCGGCCATGCCAACCCGTTCGTAAGCGGCGaa                                                                                                                              <  4:229573/148‑1 (MQ=255)                              cGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTc                                                                                                                                          >  6:317134/1‑132 (MQ=255)                              cGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTc                                                                                                                                          <  5:317134/132‑1 (MQ=255)                              cGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAgc                                                                                                                                    <  7:253976/138‑1 (MQ=255)                              cGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAgc                                                                                                                                    >  8:253976/1‑138 (MQ=255)                                                          agcaacagcTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTgg                                                                                              >  8:129049/1‑148 (MQ=255)                                                           gcaacagcTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTgg                                                                                              >  1:125751/1‑147 (MQ=255)                                                           caagcacggcgccgaccgaaccggcgctggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacgccgcTGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTgg                                                                                              <  7:13671‑M1/57‑1 (MQ=255)                                                           caagcacggcgccgaccgaaccggcgctggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacgccgcTGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCa                                                                                            >  8:13671‑M1/91‑149 (MQ=255)                                                                   tgctgATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTg                                                                                    >  8:104677/1‑149 (MQ=255)                                                                     ctgATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTgg                                                                                   <  1:311318/148‑1 (MQ=255)                                                                     ctgATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTg                                                                                    <  7:104677/147‑1 (MQ=255)                                                                        aTGGCCTGGGACAAGCAACTCCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTaga                                                                               <  4:248268/149‑1 (MQ=255)                                                                            ccggcgACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCg                                                                           <  3:188596/144‑1 (MQ=255)                                                                             cTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGATCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCAGGTAgg                                                                                              >  6:350231/1‑129 (MQ=255)                                                                             cTGGCACAAGCAACACCCCGTGTCGGCATGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACTCAAGTGGACTGCCGGCTACAAGCCGGTTgg                                                                                              <  5:350231/129‑1 (MQ=255)                                                                                ggACAAGCAACACCCCGTGTGGGCCGGGCAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAAGCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGt                                                                         <  6:231197/147‑1 (MQ=255)                                                                                      gCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTa                                                                  >  5:293370/1‑148 (MQ=255)                                                                                       ggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacaccgcTGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAgcg                                                                                         <  4:96856‑M1/62‑1 (MQ=255)                                                                                       ggccaggcttggtttggcctctggcttggctgcgtttaccggcaccgcctctaccacaccgcTGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAgcg                                                                                         >  3:96856‑M1/63‑124 (MQ=255)                                                                                        aaCACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAgcg                                                                                         <  5:226435/123‑1 (MQ=255)                                                                                        aaCACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAgcg                                                                                         >  6:226435/1‑123 (MQ=255)                                                                                          cacCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGc                                                             <  7:129049/149‑1 (MQ=255)                                                                                             cccGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCagc                                                          >  7:196170/1‑149 (MQ=255)                                                                                                gtgtCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCagcc                                                         >  4:72233/1‑147 (MQ=255)                                                                                                           ggAGAAAGAACGCGACCGGCGCATTGCCGCGATCAGGGGCCATGCCAACCCGTGCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCa                                            <  8:254437/149‑1 (MQ=255)                                                                                                                    aCGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGc                                    <  2:176595/148‑1 (MQ=255)                                                                                                                      gcgACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCagccaa                                                       <  8:41376/127‑1 (MQ=255)                                                                                                                      gcgACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCagccaa                                                       >  7:41376/1‑127 (MQ=255)                                                                                                                      gcgACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTg                                 <  6:293370/149‑1 (MQ=255)                                                                                                                                     ccGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGATGCCAAACCAAGCCTGGCCAGCGCCGGTtcg                  >  4:159683/1‑149 (MQ=255)                                                                                                                                     ccGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTtcg                  >  5:273129/1‑149 (MQ=255)                                                                                                                                     ccGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTtc                   <  4:323561/148‑1 (MQ=255)                                                                                                                                       gcgATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGt                     >  6:333753/1‑144 (MQ=255)                                                                                                                                       gcgATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGt                     <  5:333753/144‑1 (MQ=255)                                                                                                                                           tCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGATGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGgc            <  3:159683/149‑1 (MQ=255)                                                                                                                                            cATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGgcg           >  4:7039/1‑149 (MQ=255)                                                                                                                                                   cATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGGCGCCGTGCt    <  3:72233/149‑1 (MQ=255)                                                                                                                                                     TGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGGCGCCGTGCTTg  >  5:237555‑M1/1‑149 (MQ=255)                                                                                                                                                     TGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGGCGCCGTGCTTg  >  6:273129‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCGCGATCATGGGCCATGCCAACCCGTTCGTAAGCGGCGAACGCAAGTGGACTGCCGGCTACAAGCCGGTTGGCAGCGGCGTGGTAGAGGCGGTGCCGGTAAACGCAGCCAAGCCAGAGGCCAAACCAAGCCTGGCCAGCGCCGGTTCGGTCGGCGCCGTGCTTG  >  NC_002947/3820439‑3820735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.