New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3895661 =54 (1.000)5 (0.100) 5/246 NT 9.3% coding (312/582 nt) PP_3438 membrane protein
?NC_002947 3895697 = 47 (0.920)coding (348/582 nt) PP_3438 membrane protein

CGGGCTGGGCCTGCATCAACTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCATCTCG  >  NC_002947/3895514‑3895805
                                                                                                                                                   |                                                                                                                                                   
tggcgaatcacgctgccggcccaggcccagcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggtt                                                                                                                                                    <  5:259226‑M1/2‑1 (MQ=255)
 gggCTGGGCCTGCATCAACTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTc                                                                                                                                                   <  1:88321/149‑1 (MQ=255)
    gaatcacgctgccggcccaggcccagcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGc                                                                                                                                                <  2:102997‑M1/6‑1 (MQ=255)
         ccTGCATCAACTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGc                                                                                                                                           <  7:259013/149‑1 (MQ=255)
             cATCAACTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACgg                                                                                                                                       <  7:268191/149‑1 (MQ=255)
                 ggcccaggcccagcaggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGCCTGGCACGgcg                                                                                                                                     <  6:6280‑M1/17‑1 (MQ=255)
                 aaCTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGACCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGgcg                                                                                                                                     >  3:61663/1‑147 (MQ=255)
                  actactGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAg                                                                                                                                  <  1:134547/149‑1 (MQ=255)
                  actactGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAg                                                                                                                                  >  1:289281/1‑149 (MQ=255)
                                ggctaccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTg                                                                                                                    >  5:6280‑M1/116‑149 (MQ=255)
                                ggCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGc                                                                                                                            <  5:351705/141‑1 (MQ=255)
                                ggCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGc                                                                                                                            >  6:351705/1‑141 (MQ=255)
                                   ccTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAAc                                                                                                                 >  4:311673/1‑149 (MQ=255)
                                     ccgagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAAcc                                                                                                                >  3:314758‑M1/111‑148 (MQ=255)
                                       gagatgaaacagatcggcccgtagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGaa                                                                                                                  <  7:137963‑M1/36‑1 (MQ=255)
                                       gagatgaaacagatcggcccggagatccaggtaaacagccacagcaagtgctgttcaccgccggtgtaggcacccaccccggcaacggctgccaaccaggctttggggTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGaa                                                                                                                  >  8:137963‑M1/109‑144 (MQ=255)
                                         tGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGACTGGCACGGCGCAGCGATGCAGTGGATGAACCCCaaa                                                                                                           >  3:185354/1‑149 (MQ=255)
                                           ggCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCaaa                                                                                                           <  2:204252/147‑1 (MQ=255)
                                           ggCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTAAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCaaa                                                                                                           <  4:74790/147‑1 (MQ=255)
                                              cTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTg                                                                                                      >  4:83028/1‑149 (MQ=255)
                                                 aTGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGGGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGt                                                                                                    <  8:197970/148‑1 (MQ=255)
                                                  tGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTg                                                                                                  >  7:187528/1‑149 (MQ=255)
                                                    ttGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGc                                                                                                >  6:184260/1‑149 (MQ=255)
                                                        aCTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGcc                                                                                            >  6:250410/1‑149 (MQ=255)
                                                               cGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCg                                                                                  >  8:322149/1‑149 (MQ=255)
                                                                 gtgtAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCggg                                                                                <  2:289281/149‑1 (MQ=255)
                                                                   gtAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGgcg                                                                                                                                     >  8:325115/1‑97 (MQ=255)
                                                                   gtAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGgcg                                                                                                                                     <  7:325115/97‑1 (MQ=255)
                                                                      gCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGgggtgg                                                                            <  3:83028/148‑1 (MQ=255)
                                                                      gCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGCCACGGCGCAGCGAGGCAGTGGATGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGgggtggg                                                                           >  2:275122/1‑149 (MQ=255)
                                                                       cGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGgggtgggt                                                                          <  5:250410/149‑1 (MQ=255)
                                                                         tttCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGc                                                                        >  4:209768/1‑149 (MQ=255)
                                                                         tttCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGc                                                                        >  5:326051/1‑149 (MQ=255)
                                                                               ctgTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTa                                                                     <  2:101973/146‑1 (MQ=255)
                                                                                tgTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACAcc                                                                 >  1:237277/1‑149 (MQ=255)
                                                                                 gTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCggg                                                                                >  8:173973/1‑133 (MQ=255)
                                                                                 gTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCggg                                                                                <  7:173973/133‑1 (MQ=255)
                                                                                    cATGGCGTGGAAGCTGACCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTTGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACcggcg                                                             <  4:61663/149‑1 (MQ=255)
                                                                                         cGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGaa                                                        >  1:113057/1‑149 (MQ=255)
                                                                                          gTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAAc                                                       <  8:187528/149‑1 (MQ=255)
                                                                                          gTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAAc                                                       <  2:113057/149‑1 (MQ=255)
                                                                                            ggAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAg                                                     >  6:259226/1‑149 (MQ=255)
                                                                                                    gCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTg                                               <  6:326051/147‑1 (MQ=255)
                                                                                                    gCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCt                                             >  3:221019/1‑149 (MQ=255)
                                                                                                         tGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGc                                        >  4:278685/1‑149 (MQ=255)
                                                                                                         tGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAACCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGc                                        >  6:14546/1‑149 (MQ=255)
                                                                                                            cgacgGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑AGCCGGGGTGGGTGCCTACACCGCCGGTGAACAGCACTTCCTGTGGcag                                      >  1:137191/1‑146 (MQ=255)
                                                                                                             gacgGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAACCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGtt                                    <  5:14546/149‑1 (MQ=255)
                                                                                                                      cTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGAt                           >  2:89793/1‑149 (MQ=255)
                                                                                                                          acaacGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTAc                       <  5:184260/149‑1 (MQ=255)
                                                                                                                                 acaGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGc                                                    <  4:215828/113‑1 (MQ=255)
                                                                                                                                 acaGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGc                                                    >  3:215828/1‑113 (MQ=255)
                                                                                                                                     ccTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTg            >  2:335381/1‑149 (MQ=255)
                                                                                                                                         gCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTc        <  7:322149/149‑1 (MQ=255)
                                                                                                                                          ccAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCa       >  2:21587/1‑149 (MQ=255)
                                                                                                                                          ccAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCa       <  3:278685/149‑1 (MQ=255)
                                                                                                                                          ccAAGCCCATTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTTGCAGCCGT‑‑‑TGCCGGGGTGGGTGCTTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCa       <  1:275122/149‑1 (MQ=255)
                                                                                                                                           cAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGtt          <  5:340112/145‑1 (MQ=255)
                                                                                                                                           cAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGtt          >  6:340112/1‑145 (MQ=255)
                                                                                                                                            aaGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGTAAGTGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGttt         >  1:102997/1‑148 (MQ=255)
                                                                                                                                            aaGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTgg                                         >  5:133068/1‑113 (MQ=255)
                                                                                                                                            aaGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTgg                                         <  6:133068/113‑1 (MQ=255)
                                                                                                                                               ccccTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCATCTCg  >  7:113221/1‑149 (MQ=255)
                                                                                                                                               ccccTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCATCTCg  <  1:89793/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CGGGCTGGGCCTGCATCAACTACTGTTACGCTGGCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCTGGCACGGCGCAGCGATGCAGTGGCTGAACCCCAAAGCCTGGTTGGCAGCCGT‑‑‑TGCCGGGGTGGGTGCCTACACCGGCGGTGAACAGCACTTGCTGTGGCTGTTTACCTGGATCTACGGGCCGATCTGTTTCATCTCG  >  NC_002947/3895514‑3895805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.