New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 558766963 (1.160)3 (0.060) 3/248 NT 5.0% coding (1479/1905 nt) parE DNA topoisomerase IV subunit B
?NC_002947 = 5587724 53 (1.030)coding (1424/1905 nt) parE DNA topoisomerase IV subunit B

GGGCGTAGTAGATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTGCCGCGC  >  NC_002947/5587521‑5587816
                                                                                                                                                     |                                                                                                                                                    
gggCGTAGTAGATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCG                                                                                                                                                      >  2:152344‑M1/1‑149 (MQ=255)
     tagtagATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAg                                                                                                                                                 <  2:305949/149‑1 (MQ=255)
       gtagATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGa                                                                                                                                               <  1:87152/149‑1 (MQ=255)
          gATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATg                                                                                                                                             <  6:353918/148‑1 (MQ=255)
           aTTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTAGGCGAGGATGCa                                                                                                                                           >  6:83006/1‑149 (MQ=255)
               ccTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGa                                                                                                                                                  <  6:8145/138‑1 (MQ=255)
               ccTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGa                                                                                                                                                  >  5:8145/1‑138 (MQ=255)
                cTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGa                                                                                                                                                  <  5:325282/137‑1 (MQ=255)
                cTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGa                                                                                                                                                  >  6:325282/1‑137 (MQ=255)
                 ttGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATc                                                                                                                                       <  1:1078/147‑1 (MQ=255)
                 ttGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATc                                                                                                                                       >  2:1078/1‑147 (MQ=255)
                    cccAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGc                                                                                                                                   <  5:156261/148‑1 (MQ=255)
                         gTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAgc                                                                                                                             <  4:254216/149‑1 (MQ=255)
                         gTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAgc                                                                                                                             >  2:269832/1‑149 (MQ=255)
                                cGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTg                                                                                                                      <  2:158007/149‑1 (MQ=255)
                                   tACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTgcg                                                                                                                    >  4:152215/1‑148 (MQ=255)
                                      aGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAg                                                                                                                <  3:152215/149‑1 (MQ=255)
                                        gggCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATa                                                                                                                               >  8:118355/1‑132 (MQ=255)
                                        gggCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATa                                                                                                                               <  7:118355/132‑1 (MQ=255)
                                        gggCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGt                                                                                                              >  5:129879/1‑149 (MQ=255)
                                         ggcggcATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTc                                                                                                             >  7:244620/1‑149 (MQ=255)
                                                     aCGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCg                                                                                                  >  5:7469/1‑148 (MQ=255)
                                                      cGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGGCGCACACAGCAATGTGGCGATGTGCAGCCCATCGGAGTCAGCGTCGGCGAGGATGCAGATATTGCCATAGCGAAGATGCGCAAGGTCGGTTGCACCCg                                                                                                  >  1:254753/1‑148 (MQ=255)
                                                           aCATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATcgac                                                                                           >  8:244620‑M2/1‑145 (MQ=255)
                                                                 ccAGCCTGGACGAGTGTCCGGAAGTGATGAACTTACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTGGatccgtgtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctga                                                                                      <  5:180959‑M1/148‑65 (MQ=255)
                                                                 ccAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAAt                                                                                     >  5:46841/1‑149 (MQ=255)
                                                                 ccAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAAt                                                                                     >  6:334679/1‑149 (MQ=255)
                                                                  cAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATg                                                                                    >  2:15264/1‑149 (MQ=255)
                                                                  cAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATg                                                                                    <  6:129879/149‑1 (MQ=255)
                                                                   aGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATgg                                                                                   >  6:127957/1‑149 (MQ=255)
                                                                    gCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGtt                                                                                                         >  4:188601/1‑126 (MQ=255)
                                                                    gCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGtt                                                                                                         <  3:188601/126‑1 (MQ=255)
                                                                      cTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCa                                                                                <  6:101431/149‑1 (MQ=255)
                                                                         gACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGc                                                                                                                                   >  2:145536/1‑95 (MQ=255)
                                                                         gACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGc                                                                                                                                   <  1:145536/95‑1 (MQ=255)
                                                                          aCCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGtt                                                                                                         <  4:254219/120‑1 (MQ=255)
                                                                          aCCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGtt                                                                                                         >  3:254219/1‑120 (MQ=255)
                                                                          aCCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCAc                                                                               <  2:320501/146‑1 (MQ=255)
                                                                          aCCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCAc                                                                               >  1:320501/1‑146 (MQ=255)
                                                                             aGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAAt                                                                         <  5:352936/149‑1 (MQ=255)
                                                                              gtgtCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAAtg                                                                        <  6:7469/149‑1 (MQ=255)
                                                                                 tCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAAtgtt                                                                      <  4:254817/148‑1 (MQ=255)
                                                                                 tCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAAtgtt                                                                      <  5:83006/148‑1 (MQ=255)
                                                                                 tCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAAtgtt                                                                      <  6:46841/148‑1 (MQ=255)
                                                                                  ccGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCgg                                                                                                           <  2:155527/110‑1 (MQ=255)
                                                                                  ccGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCgg                                                                                                           >  1:155527/1‑110 (MQ=255)
                                                                                     gAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCa                                                                 >  7:207090/1‑149 (MQ=255)
                                                                                          gtTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCGATGGCCACGGCAATGTTGTGCACTTc                                                             <  1:152344/148‑1 (MQ=255)
                                                                                             gaacgaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctgg                                                         >  6:145026/1‑149 (MQ=255)
                                                                                             gaacgaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGAACCAGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctgg                                                         >  7:160090/1‑149 (MQ=255)
                                                                                              aacgaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctggc                                                        >  2:260263/1‑149 (MQ=255)
                                                                                               acgaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctggct                                                       >  8:107051/1‑149 (MQ=255)
                                                                                               acgaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctggct                                                       >  1:216873/1‑149 (MQ=255)
                                                                                                 gaacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctggctgg                                                     >  8:95465/1‑149 (MQ=255)
                                                                                                  aacAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCtggctggc                                                   <  2:254753/149‑1 (MQ=255)
                                                                                                     aGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGatccgggtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctg                                                                                       >  1:321183‑M1/1‑48 (MQ=255)
                                                                                                     aGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGatccgggtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctg                                                                                       <  2:321183‑M1/111‑64 (MQ=255)
                                                                                                        cgcACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGa                                              >  4:298001/1‑149 (MQ=255)
                                                                                                           acacaGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACtt                                           <  7:107051/149‑1 (MQ=255)
                                                                                                           acacaGAAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCCCACCGATCGACGCCAATGGCCACGCCAATGTTGTGCACTTCATGGCTGGCCAGGACt                                            >  7:111473/1‑148 (MQ=255)
                                                                                                            cacaGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTc                                          <  5:145026/149‑1 (MQ=255)
                                                                                                              caGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGc                                        <  5:334679/149‑1 (MQ=255)
                                                                                                               aGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCAAGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGcc                                       >  5:153877/1‑149 (MQ=255)
                                                                                                                 cAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCaa                                                                          <  4:167563/113‑1 (MQ=255)
                                                                                                                    tgtgGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATcgacgc                                                                                         <  4:126052‑M2/95‑7 (MQ=255)
                                                                                                                    tgtgGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATcgacgc                                                                                         >  3:126052‑M2/1‑89 (MQ=255)
                                                                                                                            tgtgCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTcc                          <  1:269832/149‑1 (MQ=255)
                                                                                                                                cAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCCAGGACTTCGCCCCCGTCCACTTCCCAg                       <  1:15264/149‑1 (MQ=255)
                                                                                                                                       tCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAg               >  1:135205/1‑149 (MQ=255)
                                                                                                                                             tCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctgg                                                         >  6:35380/1‑102 (MQ=255)
                                                                                                                                             tCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCctgg                                                         <  5:35380/102‑1 (MQ=255)
                                                                                                                                             tCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACACGGATccacgctgactccgatggtctgcacatcgccacattgctgtgtgcgctgtaagttcatcacttccggacactcgtccaggctgg           <  5:180959‑M2/148‑85 (MQ=255)
                                                                                                                                              cAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATcgacgctgactccgatggtctgcacatcgccacattgctgtgtgcgct                                               <  2:321183‑M2/111‑49 (MQ=255)
                                                                                                                                              cAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATcgacgctgactccgatggtctgcacatcgccacattgctgtgtgcgct                                               >  1:321183‑M2/1‑63 (MQ=255)
                                                                                                                                               aGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTg        <  7:95465/148‑1 (MQ=255)
                                                                                                                                               aGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTGc       >  8:225846/1‑149 (MQ=255)
                                                                                                                                                gCGTCGatccgggtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctgactccgatggtctgcacatcgccaca                                                             >  3:126052‑M1/1‑6 (MQ=255)
                                                                                                                                                gCGTCGatccgggtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctgactccgatggtctgcacatcgccaca                                                             <  4:126052‑M1/95‑90 (MQ=255)
                                                                                                                                                gCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTGcc      >  7:104116/1‑149 (MQ=255)
                                                                                                                                                gCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTGcc      <  1:260263/149‑1 (MQ=255)
                                                                                                                                                  gTCGatccgggtgcaaccgaccttgcgcagctgcgctatggcaagatctgcatcctcgccgacgctgactccgatggtctgcacatcgccacattgctgtgtgcgctgttcgttcaacacttccggacactggtcgaggctgggcatgt     >  8:244620‑M1/1‑4 (MQ=255)
                                                                                                                                                    cGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCCTGCcgctg  >  6:249976/1‑147 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GGGCGTAGTAGATTTCCTTGCCCAGGTCGATGCGGTACAGGGGCGGCATGGCCACGTAAACATGCCCAGCCTCGACCAGTGTCCGGAAGTGTTGAACGAACAGCGCACACAGCAATGTGGCGATGTGCAGACCATCGGAGTCAGCGTCGGCGAGGATGCAGATCTTGCCATAGCGCAGCTGCGCAAGGTCGGTTGCACCCGGATCGACGCCAATGGCCACGGCAATGTTGTGCACTTCCTGGCTGGCCAGGACTTCGCCCCCGTCCACTTCCCAGGTGTTGAGGATCTTGCCGCGC  >  NC_002947/5587521‑5587816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.