New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 277706 =59 (1.090)5 (0.100) 5/242 NT 8.9% coding (800/1242 nt) PP_0224 DszC family monooxygenase
?NC_002947 277759 = 48 (0.950)coding (747/1242 nt) PP_0224 DszC family monooxygenase

GGCAATTACATAAGGGTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGACAATGCGCAACCCCGGGCTTC  >  NC_002947/277612‑277907
                                                                                                                                                    |                                                                                                                                                     
cgccagcggtaccgtgctgctggaccaggtgccggttgacgcggaactggtgatcgacaactggcgccagcgcgatatccccaacattcagggcGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGgcgc                                                                                                                                                     >  6:328132‑M1/95‑149 (MQ=255)
        cATAAGGGTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCACGATCAGCTGCGAATCGGCGCCCTGAATg                                                                                                                                             >  4:280069/1‑149 (MQ=255)
          tAAGGGTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCTTCATCGATAGCCGCTTCGGCAATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGtt                                                                                                                                           <  8:124353/149‑1 (MQ=255)
            aGGGTCGTCACTGCCACGGTCGACGTTGGCTTCTATCGACGGCCGGGACTTTTCGCGCACGAAGGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTgg                                                                                                                                         <  8:153054/149‑1 (MQ=255)
             gggTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        <  4:146413/149‑1 (MQ=255)
             gggTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        <  1:67300/149‑1 (MQ=255)
               gtcgtcACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGa                                                                                                                                      >  2:346559/1‑149 (MQ=255)
                   tcACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATc                                                                                                                                  <  6:79156/149‑1 (MQ=255)
                       tGGCACGGTCGACGTTGGCTTCAATCAACGGCCGGGACTTTTAGCGCAAGAACGTAAAAGAAAAAACAATAACCGCATAGGCGATGCCAGCATCAAACGCCCCCAGGAAAAGATGCCAAACGCCAACCAGAATGTTGGGAATAAcgcg                                                                                                                               >  2:309134/1‑148 (MQ=255)
                         gCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCgcgc                                                                                                                              <  2:107210/147‑1 (MQ=255)
                         gCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTg                                                                                                                            <  3:113415/149‑1 (MQ=255)
                             gttagACGTTGGATTCTTTCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGgcgc                                                                                                                        <  6:265872/145‑1 (MQ=255)
                               tCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        >  3:76470/1‑131 (MQ=255)
                               tCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        <  4:76470/131‑1 (MQ=255)
                               tCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGgcgc                                                                                                                        >  2:291728/1‑147 (MQ=255)
                                 gACGTTGGCTTCTATACACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATGGCCGCCTGGATCAGCTGCGAAGCGTGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAg                                                                                                                     <  1:57498/149‑1 (MQ=255)
                                  aCGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGata                                                                                                                                    <  6:12181/132‑1 (MQ=255)
                                    gTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGgcgc                                                                                                                                                     >  2:133359/1‑113 (MQ=255)
                                    gTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGgcgc                                                                                                                                                     <  1:133359/113‑1 (MQ=255)
                                         cTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGAt                                                                                                             >  4:325221/1‑148 (MQ=255)
                                          ttCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        <  4:268933/120‑1 (MQ=255)
                                          ttCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTggg                                                                                                                                        >  3:268933/1‑120 (MQ=255)
                                            cTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATc                                                                                                            <  8:226537/146‑1 (MQ=255)
                                            cTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATc                                                                                                            >  7:226537/1‑146 (MQ=255)
                                              aTCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATc                                                                                                            >  8:71961/1‑144 (MQ=255)
                                              aTCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATc                                                                                                            <  7:71961/144‑1 (MQ=255)
                                              aTCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAg                                                                                                       >  4:170134/1‑149 (MQ=255)
                                               tCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCa                                                                                                        <  1:309134/147‑1 (MQ=255)
                                                  aCGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTcc                                                                                                   >  7:204919/1‑149 (MQ=255)
                                                      cctggACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCa                                                                                                        <  7:64884/137‑1 (MQ=255)
                                                      ccGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCa                                                                                                        <  1:76148/141‑1 (MQ=255)
                                                      ccGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCa                                                                                                        >  2:76148/1‑140 (MQ=255)
                                                      ccGGGACTTTTCGCGCACGAACGTCATCGCATCATCGATAGCCGCTTCCGCGATGCCGGCGTCGAACGCCGCCTCGATCAGCTGAGAAGCGGCGCCCTGAATGTTGCGGATATCGCGCTGGCGCCAGTAGACGATCACCAgacatcgc                                                                                                >  8:64884/1‑141 (MQ=255)
                                                                tCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCa                                                                                      <  3:325221/148‑1 (MQ=255)
                                                                    gcACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTgg                                                                                 <  3:170134/149‑1 (MQ=255)
                                                                          aCGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCcagc                                                                           <  1:291728/149‑1 (MQ=255)
                                                                              gATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGGCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCAcc                                                                                                         <  4:245615/115‑1 (MQ=255)
                                                                              gATCGCATCATCGATAGCAGCTTCGGCGATCCCCGCGACGATCGCCGCCAGGATCAGCTCCGAAGCGGCGCCCTGAATGTAGGGGATAACGCGCTGGCGCCAGATGTCGATCAca                                                                                                         >  3:245615/1‑114 (MQ=255)
                                                                                   catcatCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTa                                                                  <  1:37900/149‑1 (MQ=255)
                                                                                     tcatcGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTAcc                                                                >  2:268901/1‑149 (MQ=255)
                                                                                           aTAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCcgcg                                                                                                <  2:45605/111‑1 (MQ=255)
                                                                                           aTAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCcgcg                                                                                                >  1:45605/1‑111 (MQ=255)
                                                                                             gcgccgcttcgcagctgatccaggcggcgatcgacgccggcatcgccgaagcggcGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCg                                                         >  6:328132‑M2/56‑149 (MQ=255)
                                                                                               gccgcttcgcagctgatccaggcggcgatcgacgccggcatcgccgaagcggcGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTAcc                                                                <  3:76586‑M2/87‑1 (MQ=255)
                                                                                               gccgcttcgcagctgatccaggcggcgatcgacgccggcatcgccgaagcggcGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTAcc                                                                >  4:76586‑M2/54‑140 (MQ=255)
                                                                                                ccgcttcgcagctgatccaggcggcgatcgacgccggcatcgccgaagcggcGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCggtg                                                      >  7:251303‑M2/53‑149 (MQ=255)
                                                                                                  gcttcgcagctgatccaggcggcgatcgacgccggcatcgccgaagcggcGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCggtggt                                                    <  8:251303‑M2/99‑1 (MQ=255)
                                                                                                        cGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTgg                                             <  1:346559/149‑1 (MQ=255)
                                                                                                                     gATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGAc                                 >  6:49724/1‑148 (MQ=255)
                                                                                                                      aTCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCa                               <  1:268901/149‑1 (MQ=255)
                                                                                                                              cTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGa                       <  3:280069/149‑1 (MQ=255)
                                                                                                                              cTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGa                       <  8:204919/149‑1 (MQ=255)
                                                                                                                                ggATCAGCTGCGAAGAGGCGCCATGAATGTTGGGGATATCGCGCTGGCGCAAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACCGTACCGCTGGCGGAGGTGCGCTGGCCGAACCAGGACCAGTCATCGAc                      >  6:353017/1‑148 (MQ=255)
                                                                                                                                 gATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGACaa                    >  3:233018/1‑149 (MQ=255)
                                                                                                                                  aTCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGTTGCGCTGGCCGAACCAGGACCAGTCATCGACAAt                   >  2:307703/1‑149 (MQ=255)
                                                                                                                                   tCAGCTGCGTAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGACAATg                  <  5:353017/149‑1 (MQ=255)
                                                                                                                                      gCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGAc                                 <  2:18111/131‑1 (MQ=255)
                                                                                                                                      gCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGAc                                 >  1:18111/1‑131 (MQ=255)
                                                                                                                                                    gcCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGACCCCGGACCAGTCATCGCCAATGCGCAACCCCGGGCTTc  >  6:145257/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGCAATTACATAAGGGTCGTCACTGGCACGGTCGACGTTGGCTTCTATCCACGGCCGGGACTTTTCGCGCACGAACGTGATCGCATCATCGATAGCCGCTTCGGCGATGCCGGCGTCGATCGCCGCCTGGATCAGCTGCGAAGCGGCGCCCTGAATGTTGGGGATATCGCGCTGGCGCCAGTTGTCGATCACCAGTTCCGCGTCAACCGGCACCTGGTCCAGCAGCACGGTACCGCTGGCGGTGGTGCGCTGGCCGAACCCGGACCAGTCATCGACAATGCGCAACCCCGGGCTTC  >  NC_002947/277612‑277907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.