New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	786605 =	57 (1.050)	3 (0.060)	3/242	NT	5.8%	intergenic (+27/‑278)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	786687 =	44 (0.870)					intergenic (+109/‑196)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor

GCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCG  >  NC_002947/786541‑786830                                                                                                                                                   |                                                                                                                                                gccTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAagag                                                                                                                                               <  3:234576/149‑1 (MQ=255)  ccTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAgg                                                                                                                                              >  1:239772/1‑149 (MQ=255)      ccGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCgg                                                                                                                                          <  1:59682/149‑1 (MQ=255)        gcgGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGca                                                                                                                                        <  5:98040/149‑1 (MQ=255)                aGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt                                                                                                                                <  2:239772/149‑1 (MQ=255)                        cAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCAt                                                                                                                        <  8:2076/149‑1 (MQ=255)                            gTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCa                                                                                                                    <  3:256471/149‑1 (MQ=255)                            gTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCATTCGCGGGCGCGCCCCCGCCCCCAGGGATCGCGGAATGTTAAGGCTATGTGGTGGCGCTGTGGGAGCGGGCATGCCCGCGCAGAGGCCGGCACCAGCCATGAATTCAtgc                                                                                                                      >  2:329882/1‑145 (MQ=255)                                  tCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGAcc                                                                                                              <  8:20633/149‑1 (MQ=255)                                          tctTCGGCTGCTGTGCCGGCCCTTTAGCGGGCTAGCCCCCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGGGGCGCGGTGGGAGCGGGCATTCCCGCGAAGAGGCCGGCACAGGCAATGAATTGATCCCAGTGACCGcccggaa                                                                                                      >  2:314816/1‑143 (MQ=255)                                            ttCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGAt                                                                                                      <  4:70186/147‑1 (MQ=255)                                             tCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTACCACAGGAATCGCGGATTCTTGAGGCTCTGTGGTGACGCTGTGGGGCCGGGCCTGCCCGCGCAGAGGCCCGCACAGGCAATGAATTCATCCCAGTGACCGCACTGCTcac                                                                                                   >  2:110866/1‑149 (MQ=255)                                               ggCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGTATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCacac                                                                                                 <  1:150165/149‑1 (MQ=255)                                               ggCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCacac                                                                                                 <  3:163271/149‑1 (MQ=255)                                                         ccGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCg                                                                                       >  2:60405/1‑149 (MQ=255)                                                           ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGaa                                                                                                                             <  5:350736/109‑1 (MQ=255)                                                           ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGaa                                                                                                                             >  6:350736/1‑109 (MQ=255)                                                           ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGc                                                                                     >  8:107364/1‑149 (MQ=255)                                                           ggCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGc                                                                                     >  8:52939/1‑149 (MQ=255)                                                            gCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGcc                                                                                    >  4:267534/1‑149 (MQ=255)                                                             cccTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGccc                                                                                   >  1:88940/1‑149 (MQ=255)                                                               cTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCcct                                                                                 <  7:52939/149‑1 (MQ=255)                                                                tttCGCGGGCTCGCCCGCTCCCACAGGAATNGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCGATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCcctc                                                                                >  1:29333/1‑149 (MQ=255)                                                                    GCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTAt                                                                            >  5:121416‑M1/1‑149 (MQ=255)                                                                     CGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATg                                                                           <  1:263853‑M1/149‑1 (MQ=255)                                                                          tCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAAcg                                                                      >  6:282577/1‑149 (MQ=255)                                                                              ccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCcca                                                                                             >  3:316850‑M2/70‑122 (MQ=255)                                                                              ccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCcca                                                                                             <  4:316850‑M2/53‑1 (MQ=255)                                                                                gctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACCCCCCCCCATCGGCCCCTCCTATGCAACGCcgcgc                                                                >  2:73993‑M2/68‑149 (MQ=255)                                                                                    ccACAGGAATCGCGGATTCTTCCGGCTCTGTGGGGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCATACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGtt                                                             <  8:5313/148‑1 (MQ=255)                                                                                          gAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCCCCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAg                                                      >  8:312467/1‑149 (MQ=255)                                                                                                 ggATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCTGCACTGGCATTGATATCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTc                                               <  1:110866/149‑1 (MQ=255)                                                                                                  gATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTc                                               >  1:319707/1‑148 (MQ=255)                                                                                                       ttcAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCGCGGCGTTgca                                                          >  6:287202/1‑130 (MQ=255)                                                                                                       ttcAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCGCGGCGTTgca                                                          <  5:287202/132‑3 (MQ=255)                                                                                                       ttcAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGtt                                                             <  8:120377/129‑1 (MQ=255)                                                                                                       ttcAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGtt                                                             >  7:120377/1‑129 (MQ=255)                                                                                                       ttcAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACttt                                         >  7:221719/1‑149 (MQ=255)                                                                                                         cAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACtt                                          <  1:314816/146‑1 (MQ=255)                                                                                                          aGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGtt                                      <  2:319707/149‑1 (MQ=255)                                                                                                             ctctGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCaa                                   <  1:60405/149‑1 (MQ=255)                                                                                                                tgtgGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAAt                                  <  1:329882/147‑1 (MQ=255)                                                                                                                tgtgGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAAt                                  <  5:282577/147‑1 (MQ=255)                                                                                                                  tggtgACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGaca                              >  5:197338/1‑149 (MQ=255)                                                                                                                    gtgACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACAcc                            <  2:263853/149‑1 (MQ=255)                                                                                                                        cGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGt                        <  5:146299/149‑1 (MQ=255)                                                                                                                         gCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCcct                                                                                 <  4:284040/91‑1 (MQ=255)                                                                                                                             tgGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTg                                                            <  6:324865/108‑1 (MQ=255)                                                                                                                             tgGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTg                                                            >  5:324865/1‑108 (MQ=255)                                                                                                                              gggAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAaca                   >  1:11949/1‑148 (MQ=255)                                                                                                                               ggAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCaa                                   >  6:150021/1‑131 (MQ=255)                                                                                                                                      gCATGCCCGCGAAGAGGCCGACACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACACCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACt          >  4:90127/1‑149 (MQ=255)                                                                                                                                       cATGCACGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTg         <  7:312467/149‑1 (MQ=255)                                                                                                                                            ccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGt                                                >  4:322023‑M2/8‑105 (MQ=255)                                                                                                                                            ccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGt                                                <  3:322023‑M2/98‑1 (MQ=255)                                                                                                                                            ccgcgaaGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCAc    >  2:102463‑M2/8‑149 (MQ=255)                                                                                                                                              gcgaaGAGGCCGGCACAGGCGATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACcg  <  2:29333‑M2/144‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                GCCTGCCGCGGGGCAAGGCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCG  >  NC_002947/786541‑786830

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.