New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1036529	44 (0.810)	4 (0.080)	4/242	NT	8.5%	coding (234/591 nt)	PP_0895	hypothetical protein
	?	NC_002947	= 1036556	45 (0.890)					coding (261/591 nt)	PP_0895	hypothetical protein

GGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGC  >  NC_002947/1036415‑1036702                                                                                                                                               |                                                                                                                                                   ggCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGg                                                                                                                                                   >  7:74384‑M2/1‑142 (MQ=255) ggCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGg                                                                                                                                                   <  8:74384‑M2/143‑2 (MQ=255)  gCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGATGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGAGCCCGAATTCCAGCAGCCATTCCTGGCCCAGgggcgcga                                                                                                                                            <  3:301661‑M2/149‑9 (MQ=255)           cTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGTCCGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCa                                                                                                                                    <  1:258882/149‑1 (MQ=255)              gCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAgtgt                                                                                                                                >  4:148617/1‑149 (MQ=255)                 aaCTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGta                                                                                                                             >  5:35659/1‑149 (MQ=255)                  aCTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGtac                                                                                                                            <  1:35293/149‑1 (MQ=255)                    tATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGtacta                                                                                                                          >  2:19866/1‑149 (MQ=255)                        cccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTc                                                                                                                      >  4:290161/1‑149 (MQ=255)                         ccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCg                                                                                                                     >  8:274231/1‑149 (MQ=255)                         ccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCg                                                                                                                     >  7:7951/1‑149 (MQ=255)                         ccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCg                                                                                                                     >  1:113372/1‑149 (MQ=255)                         ccGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCg                                                                                                                     <  7:306463/149‑1 (MQ=255)                           gCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGt                                                                                                                   <  5:212865/149‑1 (MQ=255)                               cGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGa                                                                                                                 <  3:290161/147‑1 (MQ=255)                               cGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGt                                                                                                               >  2:261244/1‑149 (MQ=255)                                  gcgcAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTc                                                                                                                      >  5:14002/1‑139 (MQ=255)                                  gcgcAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTc                                                                                                                      <  6:14002/139‑1 (MQ=255)                                                   tGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTTACGGCATAc                                                                                           >  6:299059/1‑149 (MQ=255)                                                   tGGCGCTCGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGCCCCAGGGGCGCGACCCCGCCAGTGTGTACTTCTTCGGTCAGTCGCTGGTGTTGCCGGCATAc                                                                                           >  6:264055/1‑149 (MQ=255)                                                       gcTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACcgcg                                                                                       >  3:220345/1‑149 (MQ=255)                                                           gacgacGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGAc                                                                                    <  5:264055/148‑1 (MQ=255)                                                            acgacgGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAg                                                                                  <  5:307644/149‑1 (MQ=255)                                                               acgGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGc                                                                               >  6:293759/1‑149 (MQ=255)                                                                   cAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                                                           <  8:7951/149‑1 (MQ=255)                                                                   cAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTgg                                                                           <  1:261244/149‑1 (MQ=255)                                                                         ggtCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTc                                                                     <  5:293759/149‑1 (MQ=255)                                                                           tCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGc                                                                   <  3:148617/149‑1 (MQ=255)                                                                           tCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGc                                                                   <  2:113372/149‑1 (MQ=255)                                                                             ggCGCCTCTACCGGCCTGCCGCTGGTGGATGG‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGctt                                                                 <  3:201832/149‑1 (MQ=255)                                                                                 catgtcccggccggGCGGTGGTGGAGGG‑CGGGCCCGAATTCCAGCAGCCATGCGTGGCGCCGGGGCGCTACGCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCttcttc                                                             <  7:274231/143‑1 (MQ=255)                                                                                  ctctACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCa                                                            >  7:240256/1‑149 (MQ=255)                                                                                       ccGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATc                                                          <  1:19866/146‑1 (MQ=255)                                                                                        cgtccTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAgc                                                      <  7:286274/146‑1 (MQ=255)                                                                                          gCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAgcgc                                                    <  8:240256/149‑1 (MQ=255)                                                                                               ccGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGt                                                <  4:220345/148‑1 (MQ=255)                                                                                               ccGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTc                                               >  4:290782/1‑149 (MQ=255)                                                                                                     gtggATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACg                                          <  6:35659/148‑1 (MQ=255)                                                                                                        gATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGgggcgcgacatccaccagcggcaggccggtagaggcgccgaccaccttgccgtcgtccagcgccagcacaaccaggctgcgcccggagcgggcatagttggccaggtagt                                      <  3:237409‑M2/149‑111 (MQ=255)                                                                                                          tGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGgggcgcgacatccaccagcggcaggccggtagaggcgccgaccaccttgccgtcgtccagcgccagcacaaccaggctgcgcccggagcgggcatagttggccaggtagtcg                                    <  6:71996‑M2/149‑113 (MQ=255)                                                                                                               gcgcCCGAATTCCAGCAGCCATTCCTGGCCCAGgggcgcgacatccaccagcggcaggccggtagaggcgccgaccaccttgccgtcgtccagcgccagcacaaccaggctgcgcccggagcgggcatagttggccaggtagtcggcct                                <  6:319905‑M2/149‑117 (MQ=255)                                                                                                               gcgcCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGc                                                                               <  3:106081/102‑1 (MQ=255)                                                                                                               gcgcCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGc                                                                               >  4:106081/1‑102 (MQ=255)                                                                                                                   ccGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGcc                            <  4:301661/149‑1 (MQ=255)                                                                                                                    cGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTCGTGTTGCCCGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGcc                            >  8:24398/1‑148 (MQ=255)                                                                                                                       aTTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGt                        >  6:322444/1‑149 (MQ=255)                                                                                                                        ttCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTc                                               <  6:182252/125‑1 (MQ=255)                                                                                                                        ttCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTc                                               >  5:182252/1‑125 (MQ=255)                                                                                                                                 ccATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACt               >  2:259716/1‑148 (MQ=255)                                                                                                                                 ccATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACt               <  1:259716/148‑1 (MQ=255)                                                                                                                                       cTGGCCCAGgggcgcgacatccaccagcggcaggccggtagaggcgccgaccaccttgccgtcgtccagcgccagcacaaccaggctgcgcccggagcgggcatagttggccaggtagtcggcctcgtactccggggtgccgtcgtaa         >  5:71996‑M2/1‑9 (MQ=255)                                                                                                                                          gCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCt      <  7:168274/148‑1 (MQ=255)                                                                                                                                            ccAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTgcg   >  6:181678/1‑149 (MQ=255)                                                                                                                                            ccAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTgcg   >  3:321810/1‑149 (MQ=255)                                                                                                                                             cAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTgcgc  <  5:322444/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                   GGCCGACTACCTGGCCAACTATGCCCGCTCCGGGCGCAGCCTGGTTGTGCTGGCGCTGGACGACGGCAAGGTGGTCGGCGCCTCTACCGGCCTGCCGCTGGTGGATGT‑CGCGCCCGAATTCCAGCAGCCATTCCTGGCCCAGGGGCGCGACCCGGCCAGTGTGTACTACTTCGGTGAGTCGCTGGTGTTGCCGGCATACCGCGGACAGGGCCTGGGGGTTCGCTTCTTCATCGAGCGCGAGTCCTACGCACACAAACTGGCCGAGTTCGATTACTGCGCGTTCTGCGC  >  NC_002947/1036415‑1036702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.