New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1524974	47 (0.870)	7 (0.140)	6/244	NT	13.2%	coding (606/1449 nt)	murC	UDP‑N‑acetylmuramate‑‑L‑alanine ligase
	?	NC_002947	= 1524995	48 (0.950)					coding (627/1449 nt)	murC	UDP‑N‑acetylmuramate‑‑L‑alanine ligase

GCAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCATC  >  NC_002947/1524848‑1525142                                                                                                                                                    |                                                                                                                                                    gcAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACAGGGCGACATACGAAGGTGACTTAAACAAGCTGAAGaaac                                                                                                                                                    >  6:200914/1‑148 (MQ=255)   aGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAacc                                                                                                                                                  <  3:81326‑M2/149‑4 (MQ=255)        ggCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgt                                                                                                                                             <  3:294132‑M2/149‑9 (MQ=255)         gCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTtcgtc                                                                                                                                            <  4:81326/149‑1 (MQ=255)                 cGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCt                                                                                                                                    >  2:4517/1‑149 (MQ=255)                      ccctaaggCTGAAGCACACGAAAGCGATTCCAGCTTCCTGCAACTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGca                                                                                                                                 <  5:200914/140‑1 (MQ=255)                      ccTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGca                                                                                                                                 <  4:294132/147‑1 (MQ=255)                        tGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGAAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAAc                                                                                                                             >  5:329082/1‑149 (MQ=255)                           tCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTg                                                                                                                          <  6:347272/149‑1 (MQ=255)                                 acgCAGACGAAACCGACGCCAGCCGCCTCCACCTGCAGCCGATGCTCCCGGCTGCCACCAACCTCGACGCCGACCACATGCCGACCTACGAAGGTGACTTCAACAACCTGACGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGtgc                                                                                                                    <  4:311591/147‑3 (MQ=255)                                 aaGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTc                                                                                                                                      >  4:156527/1‑131 (MQ=255)                                 aaGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTc                                                                                                                                      <  3:156527/131‑1 (MQ=255)                                   gCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTa                                                                                                                  <  1:4517/149‑1 (MQ=255)                                    cAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTAt                                                                                                                 >  8:188913/1‑149 (MQ=255)                                     aGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATg                                                                                                                >  8:260070/1‑149 (MQ=255)                                                 tGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGa                                                                                                    <  6:329082/149‑1 (MQ=255)                                                    aaGCTTCCTGCACCTGCAGCCGATGGTCGCTGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCTAGTTACTGCAAAACCTGCCGTTCTATGGGCTGGCGGTGAtgt                                                                                                 >  2:52573/2‑149 (MQ=255)                                                     aGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGAtgtg                                                                                                >  6:80933/1‑149 (MQ=255)                                                          cctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCTTCGAGTTCCTGCACAACCTGcc                                                                                                                        >  5:336225/1‑120 (MQ=255)                                                          cctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGcc                                                                                                                        <  6:336225/120‑1 (MQ=255)                                                           ctgcaccttcaGCCGATGGTCGCTGTTGGCACCAACATCTACGCCGACCAAATGGAGACCTACGAAGGTGACTTCAACCATGTTAAGAAAACCTTAGTCGATTTCCTGCACAACCTGCCTTTCTATGGGCTGTCGGTGATTTGCCTGga                                                                                          <  2:288945/149‑1 (MQ=255)                                                           ctgcacctgcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGga                                                                                          <  1:52573/149‑1 (MQ=255)                                                                   gcaGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCgg                                                                                  >  5:157633/1‑149 (MQ=255)                                                                     aGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtg                                                                                <  5:80933/149‑1 (MQ=255)                                                                       ccGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtggt                                                                              >  8:131718/1‑149 (MQ=255)                                                                         gATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTc                                                                            <  4:29496/149‑1 (MQ=255)                                                                              tCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGAcc                                                                                     >  4:75477/1‑135 (MQ=255)                                                                              tCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGAcc                                                                                     <  3:75477/135‑1 (MQ=255)                                                                              tCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtg                                                                                <  7:106933/140‑1 (MQ=255)                                                                              tCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCggtg                                                                                >  8:106933/1‑140 (MQ=255)                                                                                gcgGTTCTCACCAACATCGACGCCGACCACATCGCTACCTACGAAGGTGACTTCAACAAGATGAAGAAAACCTTCGTCGAGATCCTGCACAACCTCCCGTTCTATGGGCTGGCGGTGATCTGCCTGGACGACCAGGATGTACGCGAGAt                                                                     >  4:168217/1‑149 (MQ=255)                                                                                 cgGTTGTCACCAACATCGACGCCGTCCACATGGCGACCTACGAAGGTGACTTCAACCAGCTGAAGAAAACCTACGTCGAGTTCAAGCACAACATGAAGTTCTATGGGCTAGAGGTGATGTGACTGGACGACAATTTGTTTCGCGAGAt                                                                     >  1:268144/1‑148 (MQ=255)                                                                                 cgGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATc                                                                    <  7:131718/149‑1 (MQ=255)                                                                                  ggTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATcc                                                                   >  1:264545/1‑149 (MQ=255)                                                                                         aCCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCg                                                              >  1:89583/1‑147 (MQ=255)                                                                                           cAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGTAgg                                                          >  3:240555/1‑149 (MQ=255)                                                                                           cAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAgg                                                          >  7:73451/1‑149 (MQ=255)                                                                                             aCATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGt                                                         >  8:135125/1‑148 (MQ=255)                                                                                                  gACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAgc                                                    <  2:89583/148‑1 (MQ=255)                                                                                                   aCGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCgaga                                                                      >  4:25419/1‑129 (MQ=255)                                                                                                   aCGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCgaga                                                                      <  3:25419/129‑1 (MQ=255)                                                                                                             caTGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCTCCCGACCGTGa                                        <  7:188913/149‑1 (MQ=255)                                                                                                             caTGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGa                                        <  6:157633/149‑1 (MQ=255)                                                                                                                    aCCTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctgg                                 <  7:138208‑M2/149‑117 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtag                                        >  8:188357‑M2/1‑31 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtag                                        <  7:188357‑M2/140‑110 (MQ=255)                                                                                                                      cTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCt                               >  8:262802/1‑149 (MQ=255)                                                                                                                      cTACGAAGGTGACATCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgcttacgaaggcttcagagatcaggtagcggctggtg                               <  8:213587‑M2/149‑119 (MQ=255)                                                                                                                        aCGAAGGTGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctggtgcc                             <  7:38658‑M2/149‑121 (MQ=255)                                                                                                                         cGAATGTGACTTCAACAACCTTAAGAAAACCTTCGTCGAGTTCCTGCAGAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCtt                              <  3:168217/147‑1 (MQ=255)                                                                                                                         cGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCtt                              <  2:264545/147‑1 (MQ=255)                                                                                                                         cGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCa                            <  7:262802/149‑1 (MQ=255)                                                                                                                               tGACTTCAACAAGCTGAAGAAAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccatcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctggtgcccagctgc                      >  8:38658‑M2/1‑22 (MQ=255)                                                                                                                               tGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGaa                       <  7:260070/148‑1 (MQ=255)                                                                                                                                   ttCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGc                  >  8:300760/1‑149 (MQ=255)                                                                                                                                      aacaaGCTGAAGATAaccttcgtaggtcgccatgtggtcggcgtcgatgttggtgacaaccgcgaccagcggctgcaggtgcaggaagctggcatcgctttcgtctgcttcagcgatcaggtagcggctggtgcccagctgcgcattg                >  7:213587‑M2/1‑15 (MQ=255)                                                                                                                                      aacaaGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGa               >  4:8464/1‑149 (MQ=255)                                                                                                                                       acaaGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGa               >  8:240487/1‑148 (MQ=255)                                                                                                                                         aaGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACAt            <  7:300760/149‑1 (MQ=255)                                                                                                                                                  aaaaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCa    >  7:292583/1‑148 (MQ=255)                                                                                                                                                  aaaaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCAt   >  1:250513/1‑149 (MQ=255)                                                                                                                                                   aaaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGa                        >  3:69883/1‑127 (MQ=255)                                                                                                                                                   aaaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGa                        <  4:69883/127‑1 (MQ=255)                                                                                                                                                    aaCCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCATc  >  8:166428/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCAGCTGGGCACCAGCCGCTACCTGATCGCTGAAGCAGACGAAAGCGATGCCAGCTTCCTGCACCTGCAGCCGATGGTCGCGGTTGTCACCAACATCGACGCCGACCACATGGCGACCTACGAAGGTGACTTCAACAAGCTGAAGAAAACCTTCGTCGAGTTCCTGCACAACCTGCCGTTCTATGGGCTGGCGGTGATGTGCCTGGACGACCCGGTGGTTCGCGAGATCCTGCCGCAGGTCAAGCGCCCGACCGTGACCTACGGCTTCAGCGAAGAGGCCGACATCCGCGCCATC  >  NC_002947/1524848‑1525142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.