New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2281454 = | 63 (1.160) | 3 (0.060) | 3/240 | NT | 5.3% | coding (276/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
? | NC_002947 | 2281504 = | 50 (1.000) | coding (326/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
CAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATC > NC_002947/2281364‑2281646 | agtgccagcctggatagcgcgcttgccaaggttcccagaagccgggttcgttgcgtgcacggtagccgccgtagcctagccaatgcagttCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAAc < 4:192682‑M1/53‑1 (MQ=255) agtgccagcctggatagcgcgcttgccaaggttcccagaagccgggttcgttgcgtgcacggtagccgccgtagcctagccaatgcagttCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAAc > 3:192682‑M1/91‑143 (MQ=255) gCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTgg > 8:4596/1‑149 (MQ=255) tCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggc > 3:265022/1‑147 (MQ=255) ggcggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCGGGCGCTGGGCATGGAACTGCATTggctagg > 5:274280/1‑149 (MQ=255) ggcggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctagg < 6:261896/149‑1 (MQ=255) gcggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctaggc < 5:305447/149‑1 (MQ=255) gcggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctaggc < 3:162489/149‑1 (MQ=255) tAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCATGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTAcg < 5:296204/149‑1 (MQ=255) aTTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACggcggc < 4:331311/149‑1 (MQ=255) aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCg > 3:226461/1‑149 (MQ=255) aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCAGCTACCg > 1:22284/1‑149 (MQ=255) aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCACGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGCAACTGCATTGGCTAGGCTACGGCGGCTACCg > 1:335671/1‑149 (MQ=255) aCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt < 7:4596/149‑1 (MQ=255) ccATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTg < 4:265022/149‑1 (MQ=255) gCACGACTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTTGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGc > 7:87542/1‑148 (MQ=255) cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCAc < 8:292962/145‑1 (MQ=255) cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGc < 4:71873/147‑1 (MQ=255) cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCaa > 5:253512/1‑149 (MQ=255) aCGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAAc > 5:201197/1‑149 (MQ=255) gCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGa > 7:252988/1‑149 (MQ=255) ccTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCTGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGaa < 3:200373/149‑1 (MQ=255) cTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCAc > 4:187864/1‑140 (MQ=255) cTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCAc < 3:187864/140‑1 (MQ=255) gCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCtt < 6:201197/149‑1 (MQ=255) cTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTc > 3:40395/1‑149 (MQ=255) ccGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCGGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTg < 6:274280/148‑1 (MQ=255) ccGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTgg < 6:253512/149‑1 (MQ=255) ccGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTg < 4:297550/148‑1 (MQ=255) cGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCTGGACACGCCAACCGTGCGTGAGCTGCAGGGGCTGGGCATGGAACTTCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTggg < 5:172601/149‑1 (MQ=255) cGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTgg > 2:187641/1‑148 (MQ=255) aGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCAGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCt < 2:22284/149‑1 (MQ=255) cTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAgcgc < 4:278096/149‑1 (MQ=255) gCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTa > 3:9091/1‑149 (MQ=255) cACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGAAGGGCATGGAACTGCATTCGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTAt > 5:298702/1‑148 (MQ=255) aCCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATcc < 6:298702/149‑1 (MQ=255) gTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAgg < 4:40395/149‑1 (MQ=255) gCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTgg < 8:87542/149‑1 (MQ=255) ccggcagcgGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCa < 7:189349/142‑1 (MQ=255) cgcgGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCAt < 8:259103/149‑1 (MQ=255) gttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACt > 3:192682‑M2/54‑143 (MQ=255) gttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACt < 4:192682‑M2/90‑1 (MQ=255) gCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATcccc > 5:325572/1‑149 (MQ=255) atgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAAGCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCg > 5:295357‑M2/49‑147 (MQ=255) TGCCCAGGACACGCCAACCGTGCGGGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCTCTATCCAGGCTGGCACTGCATCCCCGAAg > 4:328619‑M1/1‑149 (MQ=255) CCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGTTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAgggg < 3:44242‑M1/149‑1 (MQ=255) CCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCaa > 5:231389‑M1/1‑84 (MQ=255) CCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCaa < 6:231389‑M1/84‑1 (MQ=255) cacGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGgcggcg > 8:53609/1‑149 (MQ=255) acGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGcggcgg > 1:159458/1‑149 (MQ=255) gCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGc > 2:34716/1‑149 (MQ=255) aCCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGc < 8:252988/149‑1 (MQ=255) cgtgcgtgACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCg < 4:226461/149‑1 (MQ=255) tgcgtgACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGt < 1:187641/149‑1 (MQ=255) tgACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTgc > 4:156459/1‑147 (MQ=255) tgACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTgc < 3:156459/147‑1 (MQ=255) aCCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCa < 4:9091/148‑1 (MQ=255) tGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCg < 7:312154/138‑1 (MQ=255) tGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCg > 8:312154/1‑138 (MQ=255) ctgggcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCAGTGCGCAGCCCTGCGCacc < 2:159458‑M2/139‑2 (MQ=255) gcatggAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATc < 1:34716‑M2/143‑1 (MQ=255) | CAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAAGGGGGCGGCGGGCTGGCCGGTGCGCAGGGCTGCGCACTGATC > NC_002947/2281364‑2281646 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |