New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 230467172 (1.330)4 (0.080) 3/250 NT 5.7% coding (171/1632 nt) PP_2027 hypothetical protein
?NC_002947 = 2304705 64 (1.230)coding (137/1632 nt) PP_2027 hypothetical protein

GCCGTGGCAGCAGGGTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGATTTTTCC  >  NC_002947/2304562‑2304853
                                                                                                                                               |                                                                                                                                                    
gcCGTGGCAGCAGGGTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctgg                                                                                                                                                 >  8:291628‑M2/1‑144 (MQ=255)
gcCGTGGCAGCAGGGTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctgg                                                                                                                                                 >  5:43506‑M2/1‑144 (MQ=255)
         gcagGGTAATGATCGAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAgg                                                                                                                                        <  8:36873/149‑1 (MQ=255)
         gcagGGTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAgg                                                                                                                                        <  3:295440/149‑1 (MQ=255)
             ggTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGt                                                                                                                                      >  1:26241/1‑147 (MQ=255)
                 aTGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTc                                                                                                                                >  5:303774/1‑149 (MQ=255)
                   gATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTc                                                                                                                                >  2:121937/1‑147 (MQ=255)
                   gATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGAGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTc                                                                                                                                >  1:55652/1‑147 (MQ=255)
                    aTCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCATGTCGGGCTTTCCGAACTGGGTGACGTCCTGGCTTTCCAGTGTCAGTTCCAg                                                                                                                             <  4:60282/149‑1 (MQ=255)
                      ccAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTcc                                                                                                                               >  5:26430/1‑145 (MQ=255)
                      ccAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTcc                                                                                                                               <  6:26430/145‑1 (MQ=255)
                           gggTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCg                                                                                                                      >  4:35365/1‑149 (MQ=255)
                           gggTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCg                                                                                                                      <  2:26241/149‑1 (MQ=255)
                            ggTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGc                                                                                                                     <  3:225178/149‑1 (MQ=255)
                                   gCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTc                                                                                                              <  2:55652/149‑1 (MQ=255)
                                    cACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTc                                                                                                              >  3:186262/1‑148 (MQ=255)
                                     aCGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTc                                                                                                              >  6:168892/1‑147 (MQ=255)
                                         gTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCg                                                                                                        >  8:49743/1‑149 (MQ=255)
                                         gTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAACTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCATTCCACGGACAGTTCAAGGCTTTCGCCAGCTTCCAggag                                                                                                        >  8:263445/1‑147 (MQ=255)
                                          tttCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCgg                                                                                                       <  4:99718/149‑1 (MQ=255)
                                                 gTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGt                                                                                                <  7:49743/149‑1 (MQ=255)
                                                    cAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCg                                                                                              <  3:35365/148‑1 (MQ=255)
                                                      gggTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTcc                                                                                                                               <  7:245160/113‑1 (MQ=255)
                                                      gggTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTcc                                                                                                                               >  8:245160/1‑113 (MQ=255)
                                                         tgtgCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTAGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTg                                                                                        >  6:204361/1‑149 (MQ=255)
                                                          gtgCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCgg                                                                                                 <  2:219437/139‑1 (MQ=255)
                                                          gtgCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCgg                                                                                                 >  1:219437/1‑139 (MQ=255)
                                                             cAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCt                                                                                    >  3:114688/1‑149 (MQ=255)
                                                                  tGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTACTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTgcag                                                                                >  7:217532/1‑148 (MQ=255)
                                                                    ttCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGcagcag                                                                             <  4:186262/149‑1 (MQ=255)
                                                                        gCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGt                                                                         <  1:121937/149‑1 (MQ=255)
                                                                         cTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGtt                                                                        >  6:204364/1‑149 (MQ=255)
                                                                            tCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCgg                                                                     >  5:15918/1‑149 (MQ=255)
                                                                              gcgTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGc                                                                    <  5:204364/148‑1 (MQ=255)
                                                                                 tGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTgg                                                                <  5:204361/149‑1 (MQ=255)
                                                                                   ccGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGc                                                              >  7:238916/1‑149 (MQ=255)
                                                                                   ccGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGc                                                              <  6:15918/149‑1 (MQ=255)
                                                                                    cgcgCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGc                                                              <  6:271381/148‑1 (MQ=255)
                                                                                    cgcgCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGc                                                              >  5:271381/1‑148 (MQ=255)
                                                                                           ttCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACgg                                                      >  3:110033/1‑149 (MQ=255)
                                                                                           ttCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACgg                                                      >  3:83352/1‑149 (MQ=255)
                                                                                           ttCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACgg                                                      >  1:233792/1‑149 (MQ=255)
                                                                                            tCGAAGTCACCTTCCAGGGCGCGCAGGTGGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCTCCAGCTTCGAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACgg                                                      <  7:263445/148‑1 (MQ=255)
                                                                                             cGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGc                                                     <  4:110033/148‑1 (MQ=255)
                                                                                                  tCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCcccat                                               >  8:81531/1‑148 (MQ=255)
                                                                                                    aCCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGc                                                                    <  2:287248/126‑1 (MQ=255)
                                                                                                    aCCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCAGCAGCAGCGGTTCGGc                                                                    >  1:287248/1‑126 (MQ=255)
                                                                                                     ccTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCttt                                                                                                                        >  5:161306/1‑73 (MQ=255)
                                                                                                     ccTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCttt                                                                                                                        <  6:161306/73‑1 (MQ=255)
                                                                                                      cTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctggaaggtgacttcgaagtgcgcggcacgcgacagctgaacagcctgcacaccctggacggcgaaacccgtgccagcacccgctggatcattaccctgctgccac                                           <  3:39363‑M2/149‑108 (MQ=255)
                                                                                                      cTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCAcagc                                              >  8:46738/1‑146 (MQ=255)
                                                                                                      cTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCAcagc                                              <  7:46738/146‑1 (MQ=255)
                                                                                                      cTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGACCTGGGCCAGCACGGCCCACAGCAgg                                           >  7:8537/1‑149 (MQ=255)
                                                                                                       ttCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctggaaggtgacttcgaagtgcgcggcacgcgacagctgaacagcctgcacaccctggacggcgaaacccgtgccagcacccgctggatcattaccctgctgccacg                                          <  7:319824‑M2/149‑109 (MQ=255)
                                                                                                       ttCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctggaaggtgacttcgaagtgcgcggcacgcgacagctgaacagc                                                                                                        >  3:189359‑M2/1‑41 (MQ=255)
                                                                                                       ttCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTcctggaaggtgacttcgaagtgcgcggcacgcgacagctgaacagc                                                                                                        <  4:189359‑M2/87‑47 (MQ=255)
                                                                                                       ttCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAggg                                          >  2:300394/1‑149 (MQ=255)
                                                                                                       ttCCAGGGCGCGCAGGTAGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAggg                                          >  5:6518/1‑149 (MQ=255)
                                                                                                         ccAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGccc                                                   >  2:328120/1‑138 (MQ=255)
                                                                                                         ccAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGccc                                                   <  1:328120/138‑1 (MQ=255)
                                                                                                          cAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTga                                       <  6:303774/149‑1 (MQ=255)
                                                                                                               cgcgcAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGgaga                                  <  4:114688/149‑1 (MQ=255)
                                                                                                               cgcgcAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGgaga                                  <  2:233792/149‑1 (MQ=255)
                                                                                                                       tggggCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGcc                          <  6:6518/147‑1 (MQ=255)
                                                                                                                           gCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAg                      >  1:134095/1‑149 (MQ=255)
                                                                                                                           gCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAg                      >  4:246692/1‑149 (MQ=255)
                                                                                                                                       gggTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATtgt           >  1:117297/1‑148 (MQ=255)
                                                                                                                                        ggTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTTGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGa                   <  5:244151/139‑1 (MQ=255)
                                                                                                                                        ggTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGa                   >  6:244151/1‑139 (MQ=255)
                                                                                                                                          tGACGTCCTGGCTTTCCAGGGTCAGTTCCACGCTATCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGAAGCGGTTCGGCCTGGCCCAGCACTGCACACAGCAGGGTGAGTAGAAAGACGCCGAAGCCAGTCATTGTGAtt       >  7:316221/1‑149 (MQ=255)
                                                                                                                                           gACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCca                                                  >  6:220096/1‑105 (MQ=255)
                                                                                                                                           gACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCca                                                  <  5:220096/105‑1 (MQ=255)
                                                                                                                                           gACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGAttt      >  5:138429/1‑149 (MQ=255)
                                                                                                                                            aCGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGAtttt     <  3:246692/149‑1 (MQ=255)
                                                                                                                                              gTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGATTTTTc   <  3:285155/149‑1 (MQ=255)
                                                                                                                                              gTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGATTTTTc   >  4:285155/1‑149 (MQ=255)
                                                                                                                                               tCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGATTTTTcc  <  8:238916/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
GCCGTGGCAGCAGGGTAATGATCCAGCGGGTGCTGGCACGGGTTTCGCCGTCCAGGGTGTGCAGGCTGTTCAGCTGTCGCGTGCCGCGCACTTCGAAGTCACCTTCCAGGGCGCGCAGGTCGGGCTTGCCGAACTGGGTGACGTCCTGGCTTTCCAGGGTCAGTTCCAGGCTTTCGCCAGCTTCCAGGCGGGTGCGGTCGACGCTGGCCTGCAGCAGCGGTTCGGCCTGGGCCAGCACGGCCCACAGCAGGGTGAGGAGAAAGACGCCGAAGCGACTCATTGTGATTTTTCC  >  NC_002947/2304562‑2304853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.