New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4474178 =	63 (1.160)	4 (0.080)	3/248	NT	6.8%	coding (1358/1536 nt)	PP_3964	transposase
	?	NC_002947	4474231 =	49 (0.950)					coding (1305/1536 nt)	PP_3964	transposase

GATAGGCATACGGATCATGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCATGCAGTTTTTTGAGGAT  >  NC_002947/4474083‑4474377                                                                                                                                                      |                                                                                                                                                    gaTAGGCATACGGATCATGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGgttg                                                                                                                                                     >  5:124513/1‑149 (MQ=255)     atcagccacggccaaagccctcgattacagcctgaaacgctcggtagcgctgacgcgctacctggatgatggggctgtgcccaccgacaacAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTtgtt‑gt                                                                                                                                                >  5:299143‑M1/92‑149 (MQ=255)      gCATACGGATCATGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTc                                                                                                                                               >  6:110646/1‑149 (MQ=255)         gccacggctaaagccctcgattacagcctgaaacgctgggtagcgctgacgcgctacctggacgatggggctgtgcccatcgacaacAGCCAGTTCCGAGCGCCCGAGTGCCCAGGGCCGTATCTGGTTCTCGACCTGGTTGTT‑GTCGa                                                                                                                                             >  1:262878‑M1/88‑149 (MQ=255)               tCATGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGcac                                                                                                                                      <  8:169955/149‑1 (MQ=255)                 aTGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAg                                                                                                                                    >  8:81819/1‑149 (MQ=255)                           aTGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCatcatc                                                                                                                          <  7:81819/149‑1 (MQ=255)                                 gcCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAgg                                                                                                                      >  4:206835/1‑147 (MQ=255)                                   cGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAgc                                                                                                                  >  6:176391/1‑149 (MQ=255)                                         gATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGt                                                                                                              >  2:81445/1‑147 (MQ=255)                                          aTCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAAGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAg                                                                                                           >  8:176042/1‑149 (MQ=255)                                           tCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAgc                                                                                                          >  7:205983/1‑149 (MQ=255)                                           tCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAgc                                                                                                          >  1:331034/1‑149 (MQ=255)                                                cTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTAc                                                                                                     <  5:176391/149‑1 (MQ=255)                                                 tCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCGGGTAGCGCTGACGCGCTAcc                                                                                                    >  2:288361/1‑149 (MQ=18)                                                   aTGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTAcc                                                                                                    >  8:299767/1‑147 (MQ=255)                                                   aTGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTAcc                                                                                                    <  5:110646/147‑1 (MQ=255)                                                    tGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTTCGTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCa                                                                                                  <  1:81445/149‑1 (MQ=255)                                                     gATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGc                                                                                                >  3:67075/1‑149 (MQ=255)                                                          ccGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGttt                                                                                            >  2:20651/1‑148 (MQ=255)                                                           cGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCa                                                                                          <  3:206835/149‑1 (MQ=255)                                                            gCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGAGCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAg                                                                                         >  2:126813/1‑149 (MQ=255)                                                            gCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAg                                                                                         <  2:331034/149‑1 (MQ=255)                                                            gCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAg                                                                                         >  1:104360/1‑149 (MQ=255)                                                                       aCCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGTCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTCCCCAGCGTTTCAGGCTGTAATc                                                                                <  7:50269/147‑1 (MQ=255)                                                                       aCCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATc                                                                                >  4:121433/1‑147 (MQ=255)                                                                        ccGCTGCGGAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGCGCCCATGGCCTTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGa                                                                              <  7:56895/148‑1 (MQ=255)                                                                        ccGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGa                                                                              <  7:299767/148‑1 (MQ=255)                                                                        ccGCTGCGCAAGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAg                                                                             <  7:176042/149‑1 (MQ=255)                                                                        cagCTGCGCAGGGATCCCGCAAATAACCAGTGC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGa                                                                              <  6:284291/146‑1 (MQ=255)                                                                         cGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAgg                                                                            >  4:218427/1‑149 (MQ=255)                                                                         cGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAgg                                                                            <  6:137603/149‑1 (MQ=255)                                                                         cGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAgg                                                                            >  8:255805/1‑149 (MQ=255)                                                                          gCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAggg                                                                           <  1:126813/149‑1 (MQ=255)                                                                               gcAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTg                                                                      <  2:104360/149‑1 (MQ=255)                                                                                      tCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTgg                                                               <  8:205983/149‑1 (MQ=255)                                                                                        tcgacaacaaccaggtcgagaaccagatacggccctgggcactcgggcgctcggaactggctGTT‑GTCGATGGGCACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGc                                                              >  1:262878‑M2/63‑149 (MQ=255)                                                                                        ccGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCa                                                                                          >  7:243351/1‑120 (MQ=255)                                                                                        ccGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCa                                                                                          <  8:243351/120‑1 (MQ=255)                                                                                        ccGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAgg                                                                                        >  6:75779/1‑122 (MQ=255)                                                                                        ccGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCt                                                             >  5:263253/1‑149 (MQ=255)                                                                                        ccGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTACGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATAATCCAGGTAGCGCTTCATCGCTACCCACCGTTACAGGCTGTAATCGACGGCTTTGGCCGTGGCt                                                             >  7:207521/1‑149 (MQ=14)                                                                                          gCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGa                                                           <  3:121433/149‑1 (MQ=255)                                                                                          gCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGa                                                           <  2:339328/149‑1 (MQ=255)                                                                                            acaacaaccaggtcgaaaaccagatacggccatgggcactcgggcgctcgaactggttGTT‑GTCGGTGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCGAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGAt                                                          >  5:299143‑M2/59‑149 (MQ=255)                                                                                              aTAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCa                                                       <  6:263253/149‑1 (MQ=255)                                                                                                 aaccaggtcgagaaccagatacggccctgggcactcgggcgctcgaactggttGTT‑GTCGATGGGCACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGtt                                                     >  4:336503‑M2/54‑149 (MQ=255)                                                                                                 ACCAGTTC‑GAGCGGCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCATGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTg                                                    >  4:67075‑M1/1‑149 (MQ=255)                                                                                                 ACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTg                                                    >  6:124513‑M1/1‑149 (MQ=255)                                                                                                      ttC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCAc                                               >  4:196486/1‑149 (MQ=255)                                                                                                          gAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATGCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCa                                             <  1:109165/148‑1 (MQ=255)                                                                                                              accagatacggccctgggcactcgggcgctcgaactggttGTT‑GTCGATGGGCACAGCCCCATCGTCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTAGCCGTGGCTGATCCGTTGGGCACCAAgtcg                                        <  3:336503‑M2/109‑2 (MQ=255)                                                                                                                ccGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCCCAGCCCCATCATCCCGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGGAATCGAGGGCTTTGGCCGTGGCTGCTCCATTTGGCACCAGGACTCg                                      >  6:194452/1‑149 (MQ=14)                                                                                                                       cccATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCttt                                                                       <  6:162569/109‑1 (MQ=40)                                                                                                                       cccATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCttt                                                                       >  5:162569/1‑109 (MQ=40)                                                                                                                             gCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATAGGGCACCAGGTCTCGCTGAGCCAACATc                         <  1:20651/149‑1 (MQ=255)                                                                                                                                   tCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCa                   >  5:345036/1‑149 (MQ=255)                                                                                                                                     tGGTTTTCGACCTGGTTGTT‑GTCGATGGACACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCATg                 >  5:329321/1‑149 (MQ=255)                                                                                                                                              aCCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCATGCAGtttttt        <  3:218427/149‑1 (MQ=255)                                                                                                                                                    gtGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCATGCAGTTTTTTGAGGAt  <  5:194452‑M2/147‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GATAGGCATACGGATCATGCCCATTCATGCGCGCCGACTGGATCAAACTCATGATTGCCGCAGCCCGCTTACCGCTGCGCAGGGATCCCGCAAATAACCAGTTC‑GAGCGCCCGAGTGCCCATGGCCGTATCTGGTTTTCGACCTGGTTGTT‑GTCGATGGGCACAGCCCCATCATCCAGGTAGCGCGTCAGCGCTACCCAGCGTTTCAGGCTGTAATCGAGGGCTTTGGCCGTGGCTGATCCATTGGGCACCAGGTCTCGCTGAGCCAACATCCAGTCATGCAGTTTTTTGAGGAT  >  NC_002947/4474083‑4474377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.