New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5545321 =NA (NA)73 (1.370) 64/256 NT 100% intergenic (‑461/+416) rpsF/rlmB 30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
?NC_002947 = 5621245 0 (0.000)coding (19/774 nt) PP_4939 hypothetical protein

Only 100 of 196 total aligned reads displayed.

GGCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCCG  >  NC_002947/5621097‑5621393
                                                                                                                                                    |                                                                                                                                                    
gcattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                      <  1:159165‑M2/2‑1 (MQ=255)
 cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                     <  6:37085‑M2/3‑1 (MQ=255)
 cattgggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctc                                                                                                                                                     <  8:65512‑M2/3‑1 (MQ=255)
  cacaGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCActct                                                                                                                                                    <  3:128872/149‑1 (MQ=255)
   acaGCGGCATGCACAGCATCGTCGCCAGAGTGTTCTGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGGGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTAACGAAGAGCGTGACGTCACTtg                                                                                                                                                    <  5:277101‑M2/148‑3 (MQ=255)
      ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtgagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatctcgcttt                                                                                                                                                >  4:14020‑M2/142‑144 (MQ=255)
      ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                 >  7:302603‑M2/142‑148 (MQ=255)
      ggaaccatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                 >  1:84217‑M2/142‑148 (MQ=255)
         accatagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTctcatagaa                                                                                                                                             >  5:215257‑M2/139‑145 (MQ=255)
           catagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGaaa                                                                                                                                           <  6:223726‑M2/13‑1 (MQ=255)
            atagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGaaaa                                                                                                                                          <  8:49507‑M2/14‑1 (MQ=255)
            atagcaaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGaaaa                                                                                                                                          <  6:60944‑M2/14‑1 (MQ=255)
              cacaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaa                                                                                                                                          <  8:34401‑M2/147‑13 (MQ=255)
               acaGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaa                                                                                                                                          <  5:52703‑M2/146‑13 (MQ=255)
                caaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                  <  4:308411‑M2/6‑1 (MQ=255)
                caaagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAgcg                                                                                                                                       >  4:22203‑M2/132‑148 (MQ=255)
                caGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaa                                                                                                                                          <  6:290778‑M2/145‑13 (MQ=255)
                  aagtattcggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCAc                                                                                                                                    >  6:167888‑M2/130‑149 (MQ=255)
                          ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCa                                                                                                                                                  >  3:81315‑M2/122‑127 (MQ=255)
                          ggcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTc                                                                                                                             <  1:74807‑M2/27‑1 (MQ=255)
                          gCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccact                                                                                                                             >  3:303244‑M2/1‑123 (MQ=255)
                           gcggctgacctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAttt                                                                                                                                               <  7:135579‑M2/9‑1 (MQ=255)
                            cAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgtt                                                                                                                          >  8:229396‑M2/1‑121 (MQ=255)
                             agagTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttc                                                                                                                         >  6:258082‑M2/1‑120 (MQ=255)
                                   ttCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaa                                                                                                                                             <  4:338217‑M2/123‑10 (MQ=255)
                                   ttCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaa                                                                                                                                             >  3:338217‑M2/1‑114 (MQ=255)
                                    ctacccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGaaaa                                                                                                                                          >  7:16906‑M2/112‑125 (MQ=255)
                                      ggTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagc                                                                                                                 >  5:290778‑M2/1‑111 (MQ=255)
                                       gTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcg                                                                                                                <  1:293951‑M2/148‑39 (MQ=255)
                                       cccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCAt                                                                                                                                                 <  3:161118‑M2/7‑1 (MQ=255)
                                       cccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGa                                                                                                               <  5:341231‑M2/41‑1 (MQ=255)
                                       cccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGa                                                                                                               >  2:120014‑M2/109‑149 (MQ=255)
                                        ccggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGAc                                                                                                              >  7:80957‑M2/108‑149 (MQ=255)
                                          ggatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACt                                                                                                             >  1:60246‑M2/106‑148 (MQ=255)
                                           gatcagtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTAt                                                                                                           >  2:248991‑M2/105‑149 (MQ=255)
                                            gaATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttc                                                                                                                     >  7:56326‑M2/1‑105 (MQ=255)
                                             aaTACCTAGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacacactgttctttctagcgaaaaaa                                                                                                          <  8:217263‑M2/148‑45 (MQ=255)
                                              aTACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaa                                                                                                         <  3:140846‑M2/148‑46 (MQ=255)
                                                gtcggcgaatgcttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCg                                                                                                         >  3:317669‑M2/100‑146 (MQ=255)
                                                  cTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAATGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttct                                                                                                                        >  7:102368‑M2/1‑99 (MQ=255)
                                                   tCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGAAGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcg                                                                                                   <  6:139951‑M2/149‑52 (MQ=255)
                                                       gAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcg                                                                                               <  2:161822‑M2/149‑56 (MQ=255)
                                                       gAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgc                                                                                                <  4:21504‑M2/148‑55 (MQ=255)
                                                       gAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgc                                                                                                >  3:21504‑M2/1‑94 (MQ=255)
                                                            ttttctagatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCg                                                                                          >  1:312410‑M2/88‑149 (MQ=255)
                                                               gcgGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaaca                                                                                                       >  2:53661‑M2/1‑86 (MQ=255)
                                                                   gatctcgatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTgg                                                                                   <  1:216363‑M2/69‑1 (MQ=255)
                                                                    gttgtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcgg                                                                                  >  7:99281‑M2/1‑81 (MQ=255)
                                                                       gtAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcg                                                                                <  1:188934‑M2/148‑71 (MQ=255)
                                                                         gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                               <  2:206933‑M2/73‑1 (MQ=255)
                                                                         gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                               <  3:22203‑M2/73‑1 (MQ=255)
                                                                         gatgtcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGa                                                                             <  8:75203‑M2/75‑1 (MQ=255)
                                                                         gatctcagtgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGt                                                                               <  1:120014‑M2/73‑1 (MQ=255)
                                                                              tCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa                                                                              >  5:150113‑M2/1‑71 (MQ=255)
                                                                              tCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaa                                                                              <  6:150113‑M2/143‑73 (MQ=255)
                                                                                gAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaatacaggcgcgcggggtcaatggcggcgaagtgttcac                                                                      >  5:139951‑M2/1‑69 (MQ=255)
                                                                                 tgcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatct                                                                                                                                                      <  6:109463‑M2/2‑1 (MQ=255)
                                                                                  gcagatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTg                                                                    >  3:242221‑M2/66‑149 (MQ=255)
                                                                                  aaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataa                                                                                                                                   <  3:4500‑M2/86‑20 (MQ=255)
                                                                                  aaCTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataa                                                                                                                                   >  4:4500‑M2/1‑67 (MQ=255)
                                                                                    agatctgacgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGtt                                                                  >  4:149640‑M2/64‑149 (MQ=255)
                                                                                        cAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttcta                                                               <  7:173123‑M2/148‑88 (MQ=255)
                                                                                         aaGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGTTCACGACGCGCTTGACGGCACTtctatcaaacaaaagataacccactcttctttctagcgaaaaacacatgcccgcgtggtcaatggcggcgaagtgttcactcttc                                                                 >  6:277101‑M2/1‑60 (MQ=255)
                                                                                           acgtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGc                                                           <  4:242221‑M2/93‑1 (MQ=255)
                                                                                             gtgtCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctat                                                              >  1:338277‑M2/1‑56 (MQ=255)
                                                                                             gtgtCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctat                                                              <  2:338277‑M2/144‑89 (MQ=255)
                                                                                             gtcatgcgcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGccc                                                         <  4:90272‑M2/95‑1 (MQ=255)
                                                                                               gtCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCAATtctatcaaacaaaagataacccacagttctttcaagcgaaaaaaacagtcgcgcggcgtcaatggcggcgaagtgttcagtcatctatacgtggt                                                       <  5:170078‑M2/149‑96 (MQ=255)
                                                                                                  tttGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttaactcttctatacgtggtca                                                     <  7:270641‑M2/148‑98 (MQ=255)
                                                                                                    tGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                                   >  7:455‑M2/1‑49 (MQ=255)
                                                                                                    gcatcctgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTc                                                   >  7:276676‑M2/48‑148 (MQ=255)
                                                                                                     gAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacag                                                  <  6:127517‑M2/148‑101 (MQ=255)
                                                                                                       gCAGATCGAACCGCACACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaa                                               >  7:217263‑M2/1‑46 (MQ=255)
                                                                                                        cAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaag                                              >  2:293951‑M2/1‑45 (MQ=255)
                                                                                                          tgtttgctgtgcgacagcgcagcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGc                                             >  1:116102‑M2/42‑148 (MQ=255)
                                                                                                           aTCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcaca                                                   >  7:313990‑M2/1‑42 (MQ=255)
                                                                                                            tCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgt                                          >  2:188934‑M2/1‑41 (MQ=255)
                                                                                                             cGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactctt                                                                  >  8:140956‑M2/1‑40 (MQ=255)
                                                                                                                  cGCCCACAACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgac                                    >  8:173123‑M2/1‑35 (MQ=255)
                                                                                                                      cacaACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggg                                >  2:80669‑M2/1‑31 (MQ=255)
                                                                                                                       acaACTGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacaggga                               <  6:235308‑M2/149‑120 (MQ=255)
                                                                                                                            tGGTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaac                          <  3:273291‑M2/149‑125 (MQ=255)
                                                                                                                              gTCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcac                                                    <  8:28349‑M2/121‑99 (MQ=255)
                                                                                                                              agcccggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAAt                        >  8:226161‑M2/22‑149 (MQ=255)
                                                                                                                               tCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggatt                             >  4:282362‑M2/1‑22 (MQ=255)
                                                                                                                               tCACGACGAGCGTGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggatt                             <  3:282362‑M2/143‑122 (MQ=255)
                                                                                                                                  cggaagggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCg                    >  5:116080‑M2/18‑149 (MQ=255)
                                                                                                                                      agggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTg                <  8:115986‑M2/136‑1 (MQ=255)
                                                                                                                                        ggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTggg              <  2:312410‑M2/138‑1 (MQ=255)
                                                                                                                                        ggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTggg              <  3:149640‑M2/138‑1 (MQ=255)
                                                                                                                                        ggctgggtgatCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTggg              <  2:60246‑M2/138‑1 (MQ=255)
                                                                                                                                           tGACGTCACTtctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgg           >  5:127517‑M2/1‑10 (MQ=255)
                                                                                                                                                 atCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGc            >  7:6855‑M2/3‑142 (MQ=255)
                                                                                                                                                    ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactctc  >  6:10292‑M2/1‑1 (MQ=255)
                                                                                                                                                    ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactctc  <  8:309625‑M2/149‑149 (MQ=255)
                                                                                                                                                    ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgacagggattaacgccgatgccatttgggccactctc  <  2:104096‑M2/149‑149 (MQ=255)
                                                                                                                                                    ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacagcaagctgtgccgac                                    >  4:22457‑M2/1‑1 (MQ=255)
                                                                                                                                                    ttctatcaaacaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtcgtcacagcaagctgtgccgac                                    <  3:22457‑M2/115‑115 (MQ=255)
                                                                                                                                                    ttctatcaaaaaaaagataacccactgttctttctagcgaaaaaaacaggcgcgcggggtcaatggcggcgaagtgttcactcttctatacgtggtcacatcaagctgtgcagacagggattaacgccgatgcaagttggggcactatc  <  4:69099‑M2/149‑149 (MQ=255)
                                                                                                                                                    TCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCCg  >  7:219518‑M2/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GGCACAGCGGCATGCACAGCATCGTCGCCAGAGTCTTCGGTGATGAATACCTCGCGAATGGGCGCGGTGTTGTAGCGATCGAAACTCTCAAGGGTGTCTTTGAGCAGATCGAACCGCCCACAACTGGTCACGACGAGCGTGACGTCACTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGCGCCG  >  NC_002947/5621097‑5621393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.