New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5876984 =	56 (1.040)	3 (0.070)	3/212	NT	7.5%	intergenic (+6/+99)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein
	?	NC_002947	5877066 =	28 (0.640)					intergenic (+88/+17)	rpiA/PP_5151	ribose‑5‑phosphate isomerase A/hypothetical protein

CGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCAA  >  NC_002947/5876920‑5877214                                                                                                                                                     |                                                                                                                                                     cggcggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAg                                                                                                                                                    <  8:308294/149‑1 (MQ=255)    cggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGCGGGGTAAACCC‑CGCCGACAAGGTAACCCCCCCGCCGGGGACCCTGGGGAGCACAGTAGGGGCGGGGTTTACCC‑CGAACaacg                                                                                                                                                  >  4:30908/1‑145 (MQ=255)    cggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACa                                                                                                                                                     <  3:30908/145‑1 (MQ=255)     ggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGccc                                                                                                                                                <  3:18718/149‑1 (MQ=255)     ggATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGccc                                                                                                                                                <  5:332381/149‑1 (MQ=255)        gctgctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACACGGTACCCCACCGGCCTGGAACCGGGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGa                                                                                                                                             <  5:256225/148‑1 (MQ=255)           gctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAAACCGCTGCTAAAAGGTACCCCACCGGCCGGGGACCCGGGGGCTACCGGTAGGAGC‑GGGGTTTCCCGCGGACAGGCccagccag                                                                                                                                          >  3:306924/1‑149 (MQ=255)            ctgctgctgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAgg                                                                                                                                         >  1:227120/1‑149 (MQ=255)                   tgGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTTAAACCCCACCAAAAACGTACCCCCCCCGCCAGGAACCCTGGCGGTCCCAGTATGAGC‑GGGGTTACACCCGCACACGCCCACACAGGccgac                                                                                                                                    >  2:128172/1‑143 (MQ=255)                                     tGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAac                                                                                                                <  2:227120/149‑1 (MQ=255)                                     tGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAac                                                                                                                <  6:342836/149‑1 (MQ=255)                                     tGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAac                                                                                                                <  6:347558/149‑1 (MQ=255)                                             cTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGaa                                                                                                        <  4:56085/149‑1 (MQ=255)                                              tGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCCCAACAACCAAGTAACCCCCCCGGCGGGAACCGGGGGGCTCCCGGGAAGAGC‑CGGTTTAACCGCGGACCCGCCCAGACAGGCGATCAGTCAGTAGGCTGGGTGGAAACAAAGaa                                                                                                        >  4:65964/1‑148 (MQ=255)                                                   gCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                                                                                   <  1:163653/116‑1 (MQ=255)                                                           aaaCCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAacac                                                                                                              <  5:20605/129‑1 (MQ=255)                                                                     C‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTgaccattta                                                                                <  2:25126‑M1/149‑5 (MQ=255)                                                                         GTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAAt                                                                             >  4:306924‑M1/1‑149 (MQ=255)                                                                          TAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg                                                                            <  7:120218‑M1/149‑1 (MQ=255)                                                                               CCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCCCTGCACAGGTAAATGGTccc                                                                       <  8:313416‑M1/149‑1 (MQ=255)                                                                                  gctcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGgtcccag                                                                     >  4:185276‑M2/68‑147 (MQ=255)                                                                                   TCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCt                                                                   <  2:150579‑M1/149‑1 (MQ=255)                                                                                    tcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg                                                                            <  8:138667‑M2/75‑1 (MQ=255)                                                                                    tcctacagggatcgccacggttccaggccggtggggtaccttgtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATg                                                                            >  7:138667‑M2/66‑140 (MQ=255)                                                                                     CTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTc                                                                 >  1:122404‑M1/1‑149 (MQ=255)                                                                                      TACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTc                                                                 <  4:43852‑M1/148‑1 (MQ=255)                                                                                       ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc                                                                                                 >  1:114752‑M1/1‑115 (MQ=255)                                                                                       ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTc                                                                                                 <  2:114752‑M1/115‑1 (MQ=255)                                                                                       ACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGACCAGTCAGTCGGCTGCTTGAACACATAGAACAGGATCGGCTCACTGACCAGGTAAAAGGTCCCCGATTCAt                                                               <  4:274711‑M1/149‑1 (MQ=255)                                                                                        CAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATc                                                              >  6:158933‑M1/1‑149 (MQ=255)                                                                                           ggTACCCAACCGGCCTGGAACCGTGGCGAACCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcatccat                                                           >  2:131756/1‑149 (MQ=255)                                                                                             tACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCg                                                         <  1:125670/149‑1 (MQ=255)                                                                                              aCCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                                                                                   <  6:164166/74‑1 (MQ=255)                                                                                              aCCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGAtca                                                                                                                                   >  5:164166/1‑74 (MQ=255)                                                                                              aCCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcatcca                                                            <  3:176067/145‑1 (MQ=255)                                                                                              aCCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTcatcca                                                            >  4:176067/1‑145 (MQ=255)                                                                                               ccccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTg                                                                                                                   <  7:170742/89‑1 (MQ=255)                                                                                               ccccACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTg                                                                                                                   >  8:170742/1‑89 (MQ=255)                                                                                                    ccGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGCCCAGGTAAATGGTCCACGCTTCAGCCATCGCAATccc                                                  >  2:148513/1‑149 (MQ=255)                                                                                                       gCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTc                                               <  7:313416/149‑1 (MQ=255)                                                                                                        ccTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTcc                                              <  1:150579/149‑1 (MQ=255)                                                                                                            gAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa                                                                                    <  2:105627/107‑1 (MQ=255)                                                                                                            gAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCa                                                                                    >  1:105627/1‑107 (MQ=255)                                                                                                              aCCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGACCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGc                                        <  3:274711/149‑1 (MQ=255)                                                                                                               ccGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCg                                       <  1:322306/149‑1 (MQ=255)                                                                                                                           ccagtaggagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGAGGCACCGTCGcc                            >  6:275693‑M2/27‑149 (MQ=255)                                                                                                                           cTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           >  3:334966/1‑149 (MQ=255)                                                                                                                           cTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           >  8:296282/1‑149 (MQ=255)                                                                                                                           cTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           <  3:43852/149‑1 (MQ=255)                                                                                                                           cTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           >  5:50689/1‑149 (MQ=255)                                                                                                                           cTGTAGGAGC‑GGGTTTACACGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTAGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           >  3:15180/1‑149 (MQ=255)                                                                                                                            gtgtaggagcgggtttacccgcgaaCAGGCCCCGCCAGGCGATCAGACACTCGGCTGCTTGAACACATAGAACAGCTTCGGCGCACAGACCAGGTAAATGGGCCCCGCTTCATCCCTCGCAATCCCCTCCGCCTGCGGCACCGTCGCCt                           <  4:258915‑M2/124‑1 (MQ=255)                                                                                                                                  gagcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAAcc                     >  5:33940‑M2/20‑149 (MQ=255)                                                                                                                                    gcgggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAAcccc                   >  6:114816‑M2/18‑149 (MQ=255)                                                                                                                                      gggtttacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTg                 <  7:118066‑M2/134‑1 (MQ=255)                                                                                                                                           tacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTgg                <  3:229659‑M2/135‑1 (MQ=255)                                                                                                                                           tacccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTgg                >  4:229659‑M2/11‑145 (MQ=255)                                                                                                                                             cccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAAccc          <  8:120218‑M2/141‑1 (MQ=255)                                                                                                                                              ccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCt         >  6:196650‑M2/8‑149 (MQ=255)                                                                                                                                              ccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCt         >  3:141287‑M2/8‑149 (MQ=255)                                                                                                                                              ccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCt         >  2:197588‑M2/8‑149 (MQ=255)                                                                                                                                              ccgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCt         <  6:33940‑M2/142‑1 (MQ=255)                                                                                                                                               cgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCtt        <  3:185276‑M2/143‑1 (MQ=255)                                                                                                                                               cgcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCtt        <  4:15180‑M2/143‑1 (MQ=255)                                                                                                                                                gcgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTg       >  5:259428‑M2/6‑149 (MQ=255)                                                                                                                                                 cgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTgc      <  1:131756‑M2/145‑1 (MQ=255)                                                                                                                                                 cgaaCAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTgc      <  5:196650‑M2/145‑1 (MQ=255)                                                                                                                                                     cAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCaa  <  1:128172/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGGCGGATCTGCTGCTGCTGGGCACCGCTGAAGGCGTGAAGAGCCTGAAGGCCGAGTAAAACCCTTCGC‑GGGTAAACCCGCTCCTACAAGGTACCCCACCGGCCTGGAACCGTGGCGATCCCTGTAGGAGC‑GGGTTTACCCGCGAACAGGCCCTGACAGGCGATCAGTCAGTCGGCTGCTTGAACACATAGAACAGGTTCGGCTCACTGACCAGGTAAATGGTCCCCGCTTCATCCATCGCAATCCCCTCCGCCTGCGGCACCGTCGCCTGCAACCCCTGGAAACCCTTGCGCAA  >  NC_002947/5876920‑5877214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.