Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,364,891 | G→C | 5.9% | V83V (GTC→GTG) | PP_3841 ← | MerR family transcriptional regulator |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,364,891 | 0 | G | C | 5.9% | 242.5 / 3.7 | 80 | V83V (GTC→GTG) | PP_3841 | MerR family transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base G (38/36); new base C (2/3); total (40/40) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 |
ATCGAAAATAGTCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTAACTGCGATAG > NC_002947/4364743‑4365038 | atcgaAAATAGTCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGgcggcg < 1:273489/149‑1 (MQ=255) tcgaAAATAGTCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGa > 5:207950/1‑149 (MQ=255) gaAAATAGTCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGAc < 5:347539/148‑1 (MQ=255) tCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCAGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGTCGCCGCCAAGATGgc < 8:246867/149‑1 (MQ=255) cACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGTCACGCTCCGCGTCCAGAAAAACATAAGCAGCCTGTAGCGTGGTTATCTTCGTTTGAATCTCGGCCATCTTGGTCGCCGCCAAGATGgc < 8:246877/148‑1 (MQ=255) aCTGACAGGACTTAAAGTAATTATCTTCCAATTGGCAATAGCACTGTCTTCAAGATTGGCAAGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATATTCGTTTGAATCTCGTCCATCTTGGCGGCGACCAAGAAGgcgc > 2:285773/1‑149 (MQ=255) cTGACAGGACTTCAAGGCATTATCTTCCCATTCGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGcc < 7:114868/149‑1 (MQ=255) tGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCt > 6:201548/1‑149 (MQ=255) ggACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgcgc < 1:296130/149‑1 (MQ=255) ggACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGATCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTTATCTTCGTTTGAATCTCGGCCATCATGCCGGCGACCAAGACGGCGCCTTgcgc > 1:203221/1‑149 (MQ=255) gACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgcgcg > 2:28250/1‑149 (MQ=255) gACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgcgcg > 1:307694/1‑149 (MQ=255) cAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGcaat > 7:285049/1‑148 (MQ=255) cAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGcaa < 2:246789/147‑1 (MQ=255) cAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGcaa < 6:35688/147‑1 (MQ=255) gCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCaatcaatc < 6:207950/149‑1 (MQ=255) aTTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCg‑t > 2:95622/1‑149 (MQ=255) cccATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGAcc < 7:26387/112‑1 (MQ=255) cccATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGAGTGGTGATCTTCGTTTGAATCTCGGCCAACATGGCGGCCAcc > 8:26387/1‑112 (MQ=255) ggCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTg < 1:119788/148‑1 (MQ=255) ggCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTg < 1:28250/148‑1 (MQ=255) gCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATTTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTgg < 1:95622/148‑1 (MQ=255) gCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTgg < 4:32804/148‑1 (MQ=255) gCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGc > 7:22193/1‑149 (MQ=255) gCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGc > 3:120788/1‑149 (MQ=255) cAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgcgc < 8:119214/121‑1 (MQ=255) cAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATATTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgcgc > 7:119214/1‑121 (MQ=255) aaTAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgc < 2:114740/118‑1 (MQ=255) aaTAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTgc > 1:114740/1‑118 (MQ=255) aTAGCACTGGCTTCAAGCTTGGCACGCTCCGCGACCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGCCGACCAAGACGGCGCCTTGCGCCCAATCAATCG‑TGTTCCCCCGCCTGGCCAc > 8:101803/1‑149 (MQ=255) cACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAg > 1:216768/1‑148 (MQ=255) cTGGCTTCAAGCTTGGCACGCTCCGCGTACAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCTACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAt < 1:285773/149‑1 (MQ=255) gCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGTGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGaa < 6:277130/145‑1 (MQ=255) gCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGTGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGaa > 5:277130/1‑145 (MQ=255) gCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTc > 3:318832/1‑149 (MQ=255) cTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAAtct < 8:285049/149‑1 (MQ=255) cTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCACAAtct > 8:155641/1‑149 (MQ=255) ggCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCa < 2:307694/148‑1 (MQ=255) aCGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGc > 2:127454/1‑147 (MQ=255) aCGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGc > 5:337675/1‑147 (MQ=255) cTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTg < 4:318832/149‑1 (MQ=255) gcgTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCGCAATCTCAGCAAGTGaaaa < 2:216768/149‑1 (MQ=255) aGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGTCTcc > 2:336475/1‑149 (MQ=255) aaaaaCATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTccc > 4:302086/1‑99 (MQ=255) aaaaaCATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTccc < 3:302086/99‑1 (MQ=255) aaaaaCATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGc > 1:304384/1‑149 (MQ=255) aCATAAGCGTCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGaa < 2:254622/135‑1 (MQ=255) aCATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCAACGCGGCGACCAAGACGGCGCCATGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGaa > 1:254622/1‑135 (MQ=255) aTAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTggg > 6:92630/1‑149 (MQ=255) aGCGGCCTGTAGCGTGGTGATCTTCGTTTGACTCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCa < 8:91930/148‑1 (MQ=255) gCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCAct > 2:249876/1‑149 (MQ=255) gCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTg > 4:263056/1‑149 (MQ=255) ccTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTCAAAAGCCTCCGCCCTGGGCACTCTGt < 1:183916/149‑1 (MQ=255) cTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAATCGTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGt < 1:249876/149‑1 (MQ=255) tAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTAt < 6:337675/147‑1 (MQ=255) tAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATg > 6:9890/1‑148 (MQ=255) cGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTTGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGaaa < 7:155641/148‑1 (MQ=255) gtgATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGt > 8:287487/1‑138 (MQ=255) gtgATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGt < 7:287487/138‑1 (MQ=255) ttCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAg > 2:75571/1‑148 (MQ=255) gTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCaa < 4:120788/148‑1 (MQ=255) tttGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACg > 5:344632/1‑149 (MQ=255) tttGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACg < 2:304384/149‑1 (MQ=255) tttGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACg < 5:9890/149‑1 (MQ=255) tGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACgg < 8:22193/148‑1 (MQ=255) gAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCGCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGt < 3:263056/148‑1 (MQ=255) aTCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTg > 5:168398/1‑149 (MQ=255) tctcGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGt > 3:286596/1‑149 (MQ=255) tcGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCAct < 5:124378/116‑1 (MQ=255) tcGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCAct > 6:124378/1‑116 (MQ=255) tcGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGtt > 3:251487/1‑148 (MQ=255) ggCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCa < 6:344632/148‑1 (MQ=255) ggCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCa < 5:201548/148‑1 (MQ=255) ggCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCGGTAGGAAAGCCAAGTCAGCAACGGTCTGTTCAc > 5:279736/1‑149 (MQ=255) cgCCGTCTTGGTCGCCGCCAAGATGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGt < 5:199711/140‑1 (MQ=255) cgCCGTCTTGGTCGCCGCCAAGATGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGt > 6:199711/2‑141 (MQ=255) ccATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTg > 3:160128/1‑149 (MQ=255) ccATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTg < 7:101803/149‑1 (MQ=255) cTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCGTTGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTa > 1:65649/1‑148 (MQ=255) ggcggcGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTg > 5:130694/1‑135 (MQ=255) ggcggcGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTg < 6:130694/135‑1 (MQ=255) gcggcgACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTAACTGCg < 1:127454/149‑1 (MQ=255) cggcgACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTAACTGCg > 8:160534/1‑148 (MQ=255) cgACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTAACTGCGATAg < 5:92630/149‑1 (MQ=255) | ATCGAAAATAGTCACTGACAGGACTTCAAGGCATTATCTTCCCATTGGCAATAGCACTGGCTTCAAGCTTGGCACGCTCCGCGTCCAGAAAAACATAAGCGGCCTGTAGCGTGGTGATCTTCGTTTGAATCTCGGCCATCTTGGCGGCGACCAAGACGGCGCCTTGCGCGCAATCAATCG‑TGTTCCCCCGCCTGGCCACTAGAAT‑GTCCCCAATCTCAGCAAGTGAAAAGCCTCCGCCCTGGGCACTCTGTATGAAAGCCAAGTCAGCAACGGTCTGTTCACTGTAACTGCGATAG > NC_002947/4364743‑4365038 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |