| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,382,881 | T→C | 6.8% | intergenic (‑92/+170) | PP_3857 ← / ← PP_3858 | hypothetical protein/tail fiber protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,382,881 | 0 | T | C | 6.8% | 214.0 / 4.3 | 73 | intergenic (‑92/+170) | PP_3857/PP_3858 | hypothetical protein/tail fiber protein |
| Reads supporting (aligned to +/- strand): ref base T (35/33); new base C (2/3); total (37/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
CATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTCGCGAC > NC_002947/4382733‑4383028 | cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGAtt < 8:217348/149‑1 (MQ=255) ttgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTg > 4:63169/1‑148 (MQ=255) cGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCa < 3:63169/147‑1 (MQ=255) cGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCa < 5:234813/147‑1 (MQ=255) ggACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGc < 4:117751/148‑1 (MQ=255) gACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATCCAATCGccgtaga < 3:79299/149‑6 (MQ=255) aacaGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTTGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGcatc < 4:55931/147‑1 (MQ=255) aacaGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGcatcat > 7:227184/1‑149 (MQ=255) acaGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCatcatc < 8:227184/149‑1 (MQ=255) caGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATcg > 6:153362/1‑149 (MQ=255) gCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATcggcg > 5:307568/1‑149 (MQ=255) cTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCggcggc < 5:153362/149‑1 (MQ=255) gCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGtt > 6:48374/1‑149 (MQ=255) gCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATCCAATCGccgta < 7:313167/129‑4 (MQ=255) gCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATCCAATCGccgta > 8:313167/1‑126 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCCAACGATTTGAGCAGGCTCGTTACGCGTCCCGCTCTACGGCGCTTGGATCGCCAGCAGCATCGGCGGCGCGCTGGTTa > 4:120536/1‑149 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGAtt > 2:73702/1‑116 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGAtt < 1:73702/116‑1 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTTGATCGCCAGCATCATCGGCGGCGAGCTGTTTa > 4:115574/1‑149 (MQ=255) ttCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGttt > 3:331234/1‑148 (MQ=255) ccAAAGCTGAAATCTCAGTCATTCACTTTTCTCCAGGCATAAAAAAACCGTCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTAc < 7:287686/148‑1 (MQ=255) ccAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTAc < 4:331234/148‑1 (MQ=255) cAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCa < 2:54570/149‑1 (MQ=255) aaaGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTg > 2:298315/1‑141 (MQ=255) aaaGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTg < 1:298315/141‑1 (MQ=255) aaaGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCAt > 5:225967/1‑149 (MQ=255) gCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGTATCGCCAGCATCATCGGAGGCGAGCTGTTTACCATTAc > 4:183160/1‑149 (MQ=255) tGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACg > 3:133763/1‑148 (MQ=255) gAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGc > 3:84809/1‑148 (MQ=255) tatCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAAc < 4:18963/149‑1 (MQ=255) tatCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAAc < 4:84809/149‑1 (MQ=255) tcattcatTCACTTTTCTCCAGGCATCAAAAAACCCTCAGTTGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACTCTCTACGTCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACg < 5:64946/148‑1 (MQ=255) tCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACg > 5:174275/1‑148 (MQ=255) aGTCATTCAGTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATCCAATCGccgtaga > 5:249603/1‑106 (MQ=255) aGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGGGATTGGATCGCCAGCATCATCGGCGGCGCGCTGTTTACCATTACGCAAGACGtga > 8:315428/1‑147 (MQ=255) aGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATCCAATCGccgtaga < 6:249603/111‑6 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatccat > 6:162884/1‑149 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatccat < 3:267458/149‑1 (MQ=255) ttCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTAAGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatcaa > 7:200806/1‑146 (MQ=255) tCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatccat > 5:323402/1‑148 (MQ=255) cACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTAc < 3:158128/131‑1 (MQ=255) cACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTAc > 4:158128/1‑131 (MQ=255) cACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcatccatc < 3:79460/148‑1 (MQ=255) aCTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCaa < 5:48374/149‑1 (MQ=255) ttCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGc < 3:183160/148‑1 (MQ=255) ctcCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCtt < 6:307568/148‑1 (MQ=255) tcCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCa > 7:192489/1‑149 (MQ=255) cATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGc < 6:174275/149‑1 (MQ=255) cATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGc < 6:225967/149‑1 (MQ=255) tCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCt > 1:242295/1‑148 (MQ=255) aaaaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCAt > 6:45867/1‑149 (MQ=255) aaaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCAtt > 4:111634/1‑149 (MQ=255) aaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 8:32528/1‑149 (MQ=255) aCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTg < 6:323402/149‑1 (MQ=255) cccGCCGTGGCGGGTTTTGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGa < 8:200806/149‑1 (MQ=255) cgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGc < 8:192489/149‑1 (MQ=255) gCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGaa < 5:162884/149‑1 (MQ=255) cGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCg > 2:221660/1‑146 (MQ=255) aaaCGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGc > 8:312810/1‑149 (MQ=255) aaaCGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGc > 4:173516/1‑149 (MQ=255) aaaCGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGc < 7:32528/149‑1 (MQ=255) ggCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCgg > 6:30008/1‑117 (MQ=255) ggCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCgg < 5:30008/117‑1 (MQ=255) ggCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGaa < 7:312810/149‑1 (MQ=255) tCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACAt > 7:46708/1‑149 (MQ=255) gTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCg > 3:268526/1‑149 (MQ=255) cgcgTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAAt < 3:173516/149‑1 (MQ=255) gTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGga < 1:221660/149‑1 (MQ=255) tCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGgaa < 5:45867/149‑1 (MQ=255) tctACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGa < 4:141966/81‑1 (MQ=255) tctACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGa > 3:141966/1‑81 (MQ=255) cGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGt > 5:234882/1‑149 (MQ=255) cGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGt > 1:209790/1‑149 (MQ=255) ggCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTc > 3:311314/1‑149 (MQ=255) ggCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTc > 6:33200/1‑149 (MQ=255) aTTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTCGCGa < 7:189073/149‑1 (MQ=255) ttGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTCGCGAc > 7:301343/1‑149 (MQ=255) | CATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTCACGCTCTACGGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAGCGGCCGAAGATCATCAGGTGCGTCATCGCACGGAACATCGGAATGGAAGAACGCCAGTCGCGAC > NC_002947/4382733‑4383028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |