| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,582,560 | A→T | 6.1% | L290M (TTG→ATG) | treSB ← | bifunctional trehalose synthase B/maltokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,582,560 | 0 | A | T | 6.1% | 245.6 / 4.0 | 82 | L290M (TTG→ATG) | treSB | bifunctional trehalose synthase B/maltokinase |
| Reads supporting (aligned to +/- strand): ref base A (39/38); new base T (3/2); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
CCACAGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTGGCGTC > NC_002947/4582414‑4582701 | ccACAGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAgg > 4:20130/1‑149 (MQ=255)ccACAGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAg < 1:135293/148‑1 (MQ=255) cacaGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAgg < 8:15552/148‑1 (MQ=255) cacaGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGc > 8:159882/1‑149 (MQ=255) cacaGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGc > 1:297368/1‑149 (MQ=255) cacaGGTAGTCGCGCTCGCGGTCGGGGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAgg < 1:131786/148‑1 (MQ=255) acaGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGc > 6:177581/1‑148 (MQ=255) caGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCa < 1:10239/149‑1 (MQ=255) ggTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATg < 3:20130/149‑1 (MQ=255) gTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATg > 3:288210/1‑148 (MQ=255) tAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCTTGGCCATgga < 4:123092/149‑3 (MQ=255) tAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTa < 2:58407/149‑1 (MQ=255) tAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTa < 7:159882/149‑1 (MQ=255) tCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCTTGGCCATggaaga < 3:259384/149‑6 (MQ=255) gcgcTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATgc > 3:176950/1‑149 (MQ=255) tCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATg < 4:271699/138‑1 (MQ=255) tCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATg > 3:271699/1‑138 (MQ=255) tCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCgg > 2:325742/1‑149 (MQ=255) gtcggtGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATc > 7:237853/1‑148 (MQ=255) ggtGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAAc < 4:18218/148‑1 (MQ=255) aCCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACg < 5:175130/145‑1 (MQ=255) aCCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACg > 6:175130/1‑145 (MQ=255) aCCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGa > 1:145315/1‑147 (MQ=255) cATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGt < 2:297368/149‑1 (MQ=255) tttCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTgg < 2:172071/149‑1 (MQ=255) tttCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTg > 1:40085/1‑148 (MQ=255) ccAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGc < 1:126297/131‑1 (MQ=255) ccAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGc > 2:126297/1‑131 (MQ=255) ccAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGaaa > 4:26367/1‑142 (MQ=255) ccAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGaaa < 3:26367/142‑1 (MQ=255) aGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACAt < 2:328688/122‑1 (MQ=255) aGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACAt > 1:328688/1‑122 (MQ=255) aGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGc > 4:239490/1‑149 (MQ=255) gTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATgg < 4:288210/149‑1 (MQ=255) atcatGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTAc < 7:22900/109‑1 (MQ=255) atcatGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTAc < 7:27954/109‑1 (MQ=255) atcatGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTAc > 8:22900/1‑109 (MQ=255) atcatGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTAc > 8:27954/1‑109 (MQ=255) catGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATtcg > 1:163333/1‑149 (MQ=255) aaaaaGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCgtcgccgtcgcc > 5:216508/1‑149 (MQ=255) aaaaaGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCgtcgccgtcgcc > 2:210209/1‑149 (MQ=255) aaaaaGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCgtcgccgtcgcc > 5:313637/1‑149 (MQ=255) aaGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTc < 3:239490/149‑1 (MQ=255) aaGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTc < 3:144677/149‑1 (MQ=255) tCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGTGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGcc > 3:280371/1‑148 (MQ=255) ccACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGt < 4:176950/149‑1 (MQ=255) cACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTa > 1:266002/1‑149 (MQ=255) cTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACg < 1:145058/149‑1 (MQ=255) gCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACgg < 2:163333/147‑1 (MQ=255) ggCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCgtgt > 6:166351/1‑149 (MQ=255) ggCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCgtg < 2:145315/148‑1 (MQ=255) gCCGGGCTGTCCGGGGGCGGGCGCAGGATGTCGGTGATAGGGACGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCgtgt < 8:237853/148‑1 (MQ=255) gATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGTGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAg < 4:280371/149‑1 (MQ=255) gATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGcc < 6:322430/61‑1 (MQ=255) gATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGcc > 5:322430/1‑61 (MQ=255) gATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAg < 2:266002/149‑1 (MQ=255) ttCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACgg < 8:110194/132‑1 (MQ=255) ttCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACgg > 7:110194/1‑132 (MQ=255) ttCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGc > 1:191670/1‑148 (MQ=255) ttCCGAGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGc > 6:91491/1‑148 (MQ=255) ggggTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCTTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTc < 7:280002/140‑1 (MQ=255) ggggTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCATCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTc > 8:280002/1‑140 (MQ=255) tCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTg > 1:18473/1‑149 (MQ=255) gcAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCg < 6:216508/149‑1 (MQ=255) ggTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCgg < 6:207140/140‑1 (MQ=255) ggTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCgg > 5:207140/1‑140 (MQ=255) tGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATg < 1:325742/149‑1 (MQ=255) aTAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGc > 2:241239/1‑148 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTTCATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCg > 7:77641/1‑149 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATg < 5:39002/143‑1 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATg > 6:39002/1‑143 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATc > 1:316629/1‑148 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATc < 2:316629/148‑1 (MQ=255) ggAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCg < 2:40085/149‑1 (MQ=255) catgtacATGGCCTTGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGt > 4:323393/7‑149 (MQ=255) atgtacATGGCCTTGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGtt > 6:273452/6‑149 (MQ=255) ttCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTgg > 4:228192/1‑149 (MQ=255) ttCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTgg > 8:273682/1‑149 (MQ=255) ccATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCGTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTGGc < 6:313637/148‑1 (MQ=255) acATGGCCTTGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTCGGCg > 3:291181/2‑149 (MQ=255) cATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTGGCGt > 5:67666/1‑149 (MQ=255) aTGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTGGCGTc < 2:18473/149‑1 (MQ=255) | CCACAGGTAGTCGCGCTCGCGGTCGGTGACCATTTCCAGGGTCAGTTCATCATGGTTGCGCAAAAAGATCGCCCACTGGCAGTTGGCCGGGATTTCCGGGGTCTGGCGCAGGATGTCGGTGATAGGGAAGCGGTCTTCCATGGCCAAGGCCATGTACATGCGCGGCATCAACGGAAAGTGGAAAGCCATATGGCATTCGTCGCCGTCGCCTTCGCCGAAGTACGGGCGCGTGTCTTCAGGCCACTGGTTGGCTTCGGCCAGCAGCATGCGATCGGGGTAGTTGGCGTC > NC_002947/4582414‑4582701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |