| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 391,582 | T→G | 6.2% | L619R (CTG→CGG) ‡ | soxA → | sarcosine oxidase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 391,582 | 0 | T | G | 6.2% | 260.4 / 7.1 | 81 | L619R (CTG→CGG) ‡ | soxA | sarcosine oxidase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base T (36/40); new base G (3/2); total (39/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.62e-01 | |||||||||||
CTGGCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGCCTGCTGGAC > NC_002947/391437‑391730 | cTGGCCATCGCCGCCCGTTCGATCGGCATCACAATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCa > 5:106960/1‑149 (MQ=255) tGGCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCAt > 5:115138/1‑149 (MQ=255) ggCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATg > 7:31368/1‑149 (MQ=255) gCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCAt < 4:257967/147‑1 (MQ=255) gCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATg < 3:89808/148‑1 (MQ=255) gCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGc < 7:258831/149‑1 (MQ=255) cATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCt > 5:80924/1‑149 (MQ=255) gccgccCGTTCGATAGGCCTCACCATCCCCGTAATGGGTTACACCATGTTTCGCCCCAAATACACGCCGGTTACTTTTGGGCTGCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTgg < 1:102911/149‑1 (MQ=255) ttCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTCCACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCACGTGCCAGGCATGCAGGGCA‑GTgaagc < 8:90182/149‑2 (MQ=255) tCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGGTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGgc > 8:304342/1‑149 (MQ=255) ggCATCACCATCCCGGAAAGGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGGCACCTGTTCGAGCCCGTGCGCTTCACGTGCCAGGCATGCAGGGCA‑GTgaagcgcacgg < 1:155988/148‑8 (MQ=37) cATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGcc > 5:248130/1‑148 (MQ=255) aTCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGa < 4:169103/149‑1 (MQ=255) aCCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGtt > 3:124082/1‑149 (MQ=255) aCCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGtt > 3:129081/1‑149 (MQ=255) cATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACg > 4:289859/1‑137 (MQ=255) cATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACg < 3:289859/137‑1 (MQ=255) tCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGaa < 3:48352/149‑1 (MQ=255) ccGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGa < 7:267957/149‑1 (MQ=255) cGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGAc > 7:169283/1‑149 (MQ=255) ggTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCa < 6:133833/149‑1 (MQ=255) tACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGt > 3:72823/1‑149 (MQ=255) caccaTGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTgg > 3:335352/1‑148 (MQ=255) caccaTGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTgg > 3:1228/1‑148 (MQ=255) caccaTGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTgg > 6:182768/1‑148 (MQ=255) accaTGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGGTGTCACCTGTTCGAGCCCTTGCGCTTCAC‑TGCCCTGCATGCCTGTCACGTGAAGAACGGCGCCTAGTTCGAAGACGTCGGCCAGTGGaa < 6:342164/149‑1 (MQ=255) caTGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAgc > 7:154099/1‑149 (MQ=255) ttCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGcc < 6:248130/148‑1 (MQ=255) gCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTgg < 4:124082/149‑1 (MQ=255) gCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTgg < 4:129081/149‑1 (MQ=255) gCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTgg > 7:285697/1‑149 (MQ=255) gCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTgg < 1:144243/149‑1 (MQ=255) cccAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTa < 4:335352/149‑1 (MQ=255) aaCTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACtt > 8:11477/1‑149 (MQ=255) cGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGaaa < 1:104474/149‑1 (MQ=255) ggTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCg > 6:328776/1‑149 (MQ=255) gTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCgg < 7:11477/149‑1 (MQ=255) gTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCgg > 5:180515/1‑149 (MQ=255) gTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCgg < 5:328776/149‑1 (MQ=255) aC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTg < 4:1228/148‑1 (MQ=255) ggC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACAt < 6:106960/149‑1 (MQ=255) cgGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCAt < 1:121439/149‑1 (MQ=255) cgGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTACCGAAAGCCGGTGAAGACATCCAt > 3:128433/1‑149 (MQ=255) ggTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCAtg < 6:115138/149‑1 (MQ=255) cGGGGCGTCACTGTTGTCACCTGTTCGATCCCGTGCGCTTCAC‑TTCCCTGCATGCCTGGCACGTTAATAACGGCGCCGATTTCGAATACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGcc < 4:128433/149‑1 (MQ=255) tCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTc > 3:293793/1‑149 (MQ=255) tCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTc > 5:272927/1‑149 (MQ=255) aCTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTcgc < 4:293793/149‑1 (MQ=255) aCTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTcgc < 8:169283/149‑1 (MQ=255) tgGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGaa < 8:154099/148‑1 (MQ=255) tgGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAAt < 6:80924/149‑1 (MQ=255) tgGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAAt < 6:180515/149‑1 (MQ=255) gTCACCTGTTCGAGCCCGTGCGCTTCTC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATg > 1:183510/1‑148 (MQ=255) gTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATg > 6:53254/1‑148 (MQ=255) gTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATg < 2:308193/148‑1 (MQ=255) aCCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAg > 2:218157/1‑149 (MQ=255) ccTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAgg < 6:272927/149‑1 (MQ=255) tGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGcc > 3:29586/1‑149 (MQ=255) cGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAAt < 6:112885/137‑1 (MQ=255) cGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAAt > 5:112885/1‑137 (MQ=255) gAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTgcg > 7:62235/1‑149 (MQ=255) gCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCAAGAGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACCTCCATGCGGCCGTGCCTCGCGAAAGCAAGGCGGTGcgcg > 4:276121/1‑149 (MQ=255) gTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGATAGCCGGTGATGACATCCATGCTGACGTGACTcgcg > 6:238126/1‑127 (MQ=255) gTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTcgcg < 5:238126/127‑1 (MQ=255) gTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAg > 6:323265/1‑149 (MQ=255) cgttcTTCACGTGCCAGGCATGCAGGGCA‑GTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGc > 5:12879/5‑149 (MQ=38) ttcTTCACGTGCCAGGCATGCAGGGCA‑GTGAAGAACGGCTCCGAGTTCGAAGAAGTAGGCAAGTGGAATCGCCCTTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGATGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGt > 2:27966/3‑149 (MQ=255) ttcTTCACGTGCCAGGCATGCAGGGCA‑GTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGt > 6:252412/3‑149 (MQ=255) cgcTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCg < 5:182768/148‑1 (MQ=255) gcTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTg > 4:337326/1‑149 (MQ=255) gcTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATACAAGGCCGTGCGCGACAGCGTg > 5:258652/1‑149 (MQ=255) ttCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGaa < 4:230158/123‑1 (MQ=255) ttCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGaa > 3:230158/1‑123 (MQ=255) ttCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTggg > 4:143466/1‑149 (MQ=255) cAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGc < 8:31368/148‑1 (MQ=255) cAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATACAAGGCCGTGCGCGACAGCGTGGGc < 6:258652/148‑1 (MQ=255) aC‑TGCCCTGCATGCCTGGCACGTGAAGTACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCTACAGCGTGGGCct < 3:276121/149‑1 (MQ=255) c‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTc < 2:14312/114‑1 (MQ=255) c‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTc > 1:14312/1‑114 (MQ=255) cccTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGCctgctg < 2:183510/149‑1 (MQ=255) cccTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGCctgct < 1:218157/148‑1 (MQ=255) tGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGCCTGCTGGAc > 6:50804/1‑149 (MQ=255) | CTGGCCATCGCCGCCCGTTCGATCGGCATCACCATCCCGGAAATGGGTACCACCATGTTCCGCCCCAACTACACGCCGGTTAC‑TTTCGGC‑GCGGTAGCGGGCCGTCACTGTGGTCACCTGTTCGAGCCCGTGCGCTTCAC‑TGCCCTGCATGCCTGGCACGTGAAGAACGGCGCCGAGTTCGAAGACGTCGGCCAGTGGAAGCGCCCGTGGTACTTCCCGAAAGCCGGTGAAGACATCCATGCTGCCGTGACTCGCGAATGCAAGGCCGTGCGCGACAGCGTGGGCCTGCTGGAC > NC_002947/391437‑391730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |