| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 417,375 | A→G | 6.7% | Q362R (CAG→CGG) | waaG → | lipopolysaccharide glucosyltransferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 417,375 | 0 | A | G | 6.7% | 215.5 / 3.9 | 75 | Q362R (CAG→CGG) | waaG | lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base A (36/33); new base G (2/3); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
ACAGCGGCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCC > NC_002947/417228‑417520 | aCAGCGGCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCgcag > 3:255651/1‑149 (MQ=255) cagcagCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCgcagc < 6:17568/149‑1 (MQ=255) cAGCGGCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCgcagc < 1:317733/149‑1 (MQ=255) cAGCGGCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCgcagc < 6:263096/149‑1 (MQ=255) gCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCAtgct < 4:143913/149‑1 (MQ=255) ccTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCAtgctg > 6:351047/1‑149 (MQ=255) cTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCAtgctgc < 5:327642/149‑1 (MQ=255) tGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGcc > 3:251997/1‑149 (MQ=255) gTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCTCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCTGCGGCAtgctgtac < 4:153587/148‑4 (MQ=255) ggACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTg > 2:275513/1‑148 (MQ=255) gACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTg < 1:186007/147‑1 (MQ=255) ccGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGCCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTggg > 8:185278/1‑149 (MQ=255) gAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGCCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCaaa > 4:11475/1‑148 (MQ=255) aaCAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCaaaa > 2:93822/1‑148 (MQ=255) cAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCCTGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAAc < 2:181500/149‑1 (MQ=255) cAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGAGGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGAGCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAAc < 4:18692/149‑1 (MQ=255) aaGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAAcc > 1:312935/1‑149 (MQ=255) agagCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCg < 2:324125/149‑1 (MQ=255) gagCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGc < 5:101232/149‑1 (MQ=255) gcagcTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCa < 4:255651/148‑1 (MQ=255) aCGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGa < 6:9806/149‑1 (MQ=255) gCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGatat < 1:93822/149‑1 (MQ=255) aTCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAg < 6:277272/139‑1 (MQ=255) aTCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAg > 5:277272/1‑139 (MQ=255) tCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTgg < 3:11475/148‑1 (MQ=255) aGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAc < 5:351047/149‑1 (MQ=255) cGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCg > 6:35663/1‑116 (MQ=255) cGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCg < 5:35663/116‑1 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTTCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg < 7:160965/149‑1 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAATAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg > 2:312522/1‑149 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg > 3:217909/1‑149 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg > 6:128297/1‑149 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg > 1:253876/1‑149 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg > 5:322498/1‑149 (MQ=255) ccGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTgg < 4:251997/149‑1 (MQ=255) ccGCAGGCGCGTGCCAGCTGGGCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGc < 6:62303/127‑1 (MQ=255) tGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGa > 2:81298/1‑149 (MQ=255) ccAGCTGGTCGCGCAATGGCCTGGAATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGAt < 2:312935/148‑1 (MQ=255) cAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGc > 3:156658/1‑149 (MQ=255) cTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCtt < 7:185278/149‑1 (MQ=255) tCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGCGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGAc < 2:306425/149‑1 (MQ=255) gcgcAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACg < 5:128297/148‑1 (MQ=255) ctttctcTGGAATTTGCTGATCGCGCCTATTTTTACA‑CCATGCCGCTGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTg < 8:109683/143‑1 (MQ=255) aaTGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGGAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGAt > 1:243311/1‑134 (MQ=255) aaTGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGAt < 2:243311/134‑1 (MQ=255) ggCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAg > 7:275514/1‑149 (MQ=255) gCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGaa > 6:108549/1‑100 (MQ=255) gCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCAGGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGaa < 5:108549/100‑1 (MQ=255) tGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTg > 7:109683/1‑142 (MQ=255) tGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGgcgc > 3:175313/1‑149 (MQ=255) tGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGACGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAATCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCAGG‑GCGTGATGACTTCGACGCCGTGGATgcac > 7:290536/1‑147 (MQ=255) ggCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCAGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCt > 4:339058/1‑149 (MQ=255) gCATTTGCTGATAGCGCCGATCTGTACAGGCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CATTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCt > 1:26100/1‑149 (MQ=255) gATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAg > 7:32376/1‑149 (MQ=255) gATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAg > 4:59780/1‑149 (MQ=255) aTAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAATCCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAg < 2:253876/148‑1 (MQ=255) aTAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAgg > 1:102331/1‑149 (MQ=255) aTAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAg < 8:177008/148‑1 (MQ=255) aTAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAg < 7:208179/148‑1 (MQ=255) tAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAgg < 8:275514/148‑1 (MQ=255) cgcCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTg < 2:243767/126‑1 (MQ=255) cgcCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTg > 1:243767/1‑126 (MQ=255) ccGATCTTTACA‑GCATGCCGCAGCATGCTTCCGACTTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAACCTCCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTa < 1:275513/149‑1 (MQ=255) ccGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATc > 8:293312/1‑149 (MQ=255) tGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATc < 7:305784/143‑1 (MQ=255) tGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATc > 8:305784/1‑143 (MQ=255) tGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATCAAGCTGATATTGGACGAAC‑‑CCTTCAAACGCCTGTGGGCCCG‑GCGAGATGCCTTCGACGCCGTGCAGGCGCTGCAACGCGAGGTCTATcgc > 7:38277/1‑145 (MQ=255) gTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCt > 4:142559/1‑149 (MQ=255) gTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCt > 3:169854/1‑149 (MQ=255) tACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATcgc < 4:156658/143‑1 (MQ=255) tACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTAAAACGCCTGTGGGCCGGCGCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATcg < 1:81298/143‑1 (MQ=255) aCA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGTCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTg > 4:268995/1‑148 (MQ=255) a‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGaa < 1:312522/149‑1 (MQ=255) caggCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAgg > 6:145741/4‑149 (MQ=255) aTGCTGCGGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAg > 4:212539/1‑147 (MQ=255) aTGCTGCGGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAg > 4:208283/1‑147 (MQ=255) aTGCTGCGGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAg < 3:212539/147‑1 (MQ=255) aTGCTGCGGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAg < 3:208283/147‑1 (MQ=255) cGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAGC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGcgcc > 4:221519/1‑149 (MQ=255) | ACAGCGGCCTGGTGCTGGACGAGCCGTTCGAACAAGAGCAGCTCAACGGCTATCTGCAGCGCATGCTCGAAGACCCGCAGGCGCGTGCCAGCTGGTCGCGCAATGGCCTGGCATTTGCTGATAGCGCCGATCTGTACA‑GCATGCCGCAGCATGCTGCCGACGTGATCCTGGGGCAAAAAACCGCATGAAGCTGATATTGGCCGAAC‑‑CCTTCAAACGCCTGTGGGCCGG‑GCGTGATGCCTTCGACGCCGTGGAGGCGCTGCAAGGCGAGGTCTATCGCGAGCTGGAAGGGCGCC > NC_002947/417228‑417520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |