| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,313,019 | G→C | 6.3% | intergenic (‑338/+376) | PP_16SG ← / ← msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,313,019 | 0 | G | C | 6.3% | 225.6 / 3.7 | 75 | intergenic (‑338/+376) | PP_16SG/msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base G (36/34); new base C (3/2); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGA > NC_002947/5312872‑5313165 | ttttCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTgg > 1:291907/1‑148 (MQ=33) ttCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGaa < 8:124755/148‑1 (MQ=33) gTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAgcgc > 1:110497/1‑149 (MQ=33) gTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAgcgc < 2:110497/149‑1 (MQ=33) actcAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATATTGAAGTTTATGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACGTGCAAGGGCt > 2:92022/2‑149 (MQ=11) cGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCGCTTCCAAGTGCTGtatgat < 5:323227/149‑6 (MQ=11) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCGCTTCCAAGTGCTGtatgattc > 3:115137/1‑138 (MQ=11) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCGCTTCCAAGTGCTGtatgattc < 4:115137/145‑8 (MQ=11) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCatcatc > 2:182313/1‑149 (MQ=33) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCatcatc > 2:192039/1‑149 (MQ=33) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCatcatc > 4:250621/1‑149 (MQ=33) gcgcATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTAGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAATCGCTGTCAACCatcatc > 3:210369/1‑149 (MQ=18) cATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAAATCTTTTAGCTTCAAACAATTGGCTCGATGCGATCTCTAGTAGAGGGATGAGAATCATAAAGAAATTGGAAGCGATGTAAACAATCAtcta > 5:69675/1‑147 (MQ=11) aTTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCaa > 6:283088/1‑149 (MQ=33) cTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCg > 4:327563/1‑149 (MQ=33) tttCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTc > 8:17149/1‑148 (MQ=35) tttCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCATTc > 8:297109/1‑148 (MQ=21) tCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCg < 6:197785/147‑1 (MQ=35) cTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCa > 3:152991/1‑149 (MQ=35) tCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCAt > 3:133823/1‑149 (MQ=35) agagCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCAtt < 5:283088/148‑1 (MQ=35) tCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGt < 1:182313/147‑1 (MQ=33) tCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTa < 2:295990/148‑1 (MQ=33) tCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTa < 5:340172/148‑1 (MQ=33) tCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTa < 4:133823/148‑1 (MQ=33) tCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAg > 1:335680/1‑149 (MQ=33) aaGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGcc > 4:297842/1‑149 (MQ=33) tttATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTc < 3:255669/149‑1 (MQ=33) aTTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTc > 7:142911/1‑101 (MQ=35) aTTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTc < 8:142911/101‑1 (MQ=35) gAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCtttt < 2:291907/148‑1 (MQ=33) gAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCtttt < 7:17149/148‑1 (MQ=33) tttttGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCtt < 3:327563/149‑1 (MQ=32) ttGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCa < 3:74942/148‑1 (MQ=32) cGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCactac > 3:177140/1‑149 (MQ=32) cGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCacta < 3:250621/148‑1 (MQ=32) cGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCacta < 1:192039/148‑1 (MQ=32) gagaAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCactact > 5:34022/1‑149 (MQ=32) agaAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCactact > 4:167986/1‑148 (MQ=32) aCTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCa < 3:57783/139‑1 (MQ=31) aCTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCa > 4:57783/1‑139 (MQ=31) aCTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACt > 1:246344/1‑149 (MQ=32) tCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCg > 6:132637/1‑149 (MQ=32) gTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGt < 3:297842/148‑1 (MQ=33) gCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGACGCGCTGTCAACCATCATCGCACCCGCTTTCGATCATTCGATCGTAGCCCTTTCCGCTTTTGCCTTCAATACTTAACTCGTTGAAtt > 8:150313/1‑149 (MQ=11) cTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAAtt > 4:165334/1‑148 (MQ=35) cAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCa < 2:335680/148‑1 (MQ=37) aaaCACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTc < 5:97644/146‑1 (MQ=37) aaaCACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTc > 6:97644/1‑146 (MQ=37) aaaCACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCaa < 4:10405/148‑1 (MQ=37) acacTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAg > 4:48867/1‑147 (MQ=37) acacTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCGTCACTACTTAACTc > 4:134882/1‑134 (MQ=17) gCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTTCCTTCACTACTTAACTCGTTGAATTTCAAGGAGtttt < 4:17991/147‑1 (MQ=37) gCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGtttt > 3:17991/1‑147 (MQ=37) tCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAg > 7:196901/1‑138 (MQ=37) tCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAg < 8:196901/138‑1 (MQ=37) tCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGt > 7:33401/1‑149 (MQ=37) cGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCg < 6:34022/147‑1 (MQ=37) cGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGAt < 3:48867/149‑1 (MQ=37) gATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATg > 5:144753/1‑149 (MQ=37) tctcGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGc > 1:304967/1‑149 (MQ=37) ctcGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATg < 8:108373/144‑1 (MQ=37) ctcGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATg > 7:108373/1‑144 (MQ=37) gTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTgg < 5:132637/148‑1 (MQ=37) tAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCTATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGaa < 4:177140/149‑1 (MQ=37) gCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAg < 3:165334/148‑1 (MQ=37) ggtaGGAGAATCATAGAGCACTTGGAAGCGATGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCATTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCTATGTCGCTGGAAGTg < 6:69675/145‑1 (MQ=11) ggCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGgcg < 2:246344/149‑1 (MQ=37) cGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCa < 8:33401/149‑1 (MQ=37) gAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCTATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCAt > 1:17604/1‑149 (MQ=37) gAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCAt > 1:278752/1‑149 (MQ=37) ttgaCAGCGCTTCCAAGTGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATtat > 1:73938/4‑148 (MQ=11) aTACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATtat > 1:52657/1‑147 (MQ=37) tACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAg > 8:6098/1‑149 (MQ=37) cAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAgg < 3:167986/148‑1 (MQ=37) cTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTc < 3:168356/149‑1 (MQ=37) gAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTCGAAGTGGGGCGCATTATAAGGGGATTCga > 3:69015/1‑147 (MQ=37) | TTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTGCGATCTCTCGTAGCGGGAGGCGAATCATACAGCACTTGGAAGCGCTGTCAACCATCATCTCAACCGCTTTCGATCATTCGATCGTAGCCCTTTCAGCTTTTGCCTTCACTACTTAACTCGTTGAATTTCAAGGAGTTTTTCGTTCCGATGTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGA > NC_002947/5312872‑5313165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |