| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,313,276 | C→G | 11.1% | intergenic (‑595/+119) | PP_16SG ← / ← msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,313,276 | 0 | C | G | 11.1% | 169.5 / 12.4 | 63 | intergenic (‑595/+119) | PP_16SG/msrQ | 16S ribosomal RNA/methionine sulfoxide reductase heme‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (25/31); new base G (4/3); total (29/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.19e-01 | |||||||||||
GTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCCGC > NC_002947/5313130‑5313422 | gTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGccgcccg > 4:201943/1‑149 (MQ=255)gTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGccgcccg > 5:68749/1‑149 (MQ=255)gTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGccgcccg > 8:4051/1‑149 (MQ=255) cTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCcgcgc‑g > 6:263880/1‑149 (MQ=255) aaGTGGGGCGCAGTATAAGGGGATTCGAGACGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑Ggcgc < 4:152991/149‑1 (MQ=255) ggggCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGa < 2:17604/149‑1 (MQ=255) gggCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATTCCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGa < 1:110356/148‑1 (MQ=255) gggCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGa > 2:110356/1‑148 (MQ=255) cgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCt > 3:315883/1‑142 (MQ=255) cgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCt < 4:315883/142‑1 (MQ=255) cgcATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGAtctc < 7:163980/149‑1 (MQ=255) aTTATAATGGGATTCGAGTGGGCGTCAACCTTTTATTTCAAGAAAGTGAAATATAAGGGTAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTcaca < 4:61671/149‑1 (MQ=255) aTTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTca > 1:24418/1‑147 (MQ=255) ttATAAGGGGATTCGAGAGGGCGTCAACCTTTAATATCAAGAAAGTGAAATATAAGCCGAAATACCGTATCGGGGCTGCCAAGTGTTCGCGACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTcaca > 6:104633/1‑148 (MQ=255) ttaGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCAAAGTGGTCGCCACACCAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACCGACg > 6:134690/3‑149 (MQ=255) taAGGGGATTCGAGAGGGCGTCAAACTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGCGGCTGCCAAGTGTTCGCCACAACAGTTTAAGCGCCTATGAGATCGAGCGCCGCCCCCGC‑GGCGCTCGATCTCACAGACg > 7:151659/1‑149 (MQ=255) ggggATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATAGGGGCTGACAAGTGTTCGCCACAACAGTTTCAGCGCCTATGACATCGAGCGCCGCCCGCGC‑GGCGATCGATCTAACAGACGc > 1:270426/1‑147 (MQ=17) gATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACAGTATCGGGGCTGCCAAGTGTTCGACACAACAGTTTAAGCGCCTATTAGATCGAGCGCCGCCCTCGC‑GGCGCTCGATCTCACATACGCCa > 7:130921/1‑146 (MQ=17) ttCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATAAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAgaga > 8:46207/1‑148 (MQ=255) agGGAGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGTGAATTACCGTATCTGGGCTGCCAAGTGTTCGCCACAAGAGTTTCAGCTCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAg < 8:151659/149‑1 (MQ=18) cGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCgg < 4:300010/149‑1 (MQ=255) aaCCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGccc > 3:67060/1‑149 (MQ=255) aaCCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGccc < 3:201943/149‑1 (MQ=255) aaCCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGACCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGcc < 1:92022/148‑1 (MQ=255) cTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCgcgggc‑gg > 8:104272/1‑106 (MQ=255) cTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCgcgggc‑gg < 7:104272/106‑1 (MQ=255) tttATTTTCAAGAAAGTGAAATATAAGGGTTAATTCGGTATCGGGGGTGCCATTTGTTCGCCACAACTGTTTCTGAGTATGTGAGATCGAGCGCCGCGCGGGC‑GGCGCTCGATCTCATAGGCg < 8:147782/123‑1 (MQ=2) tttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGTCTGTGAGATCGAGCGCCGCGCGGGC‑GGCGCTCGATCTCATAGGCg > 7:147782/1‑123 (MQ=11) tttAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCtctc > 6:120449/1‑149 (MQ=255) tAATTTCAAGAAAGTGAAATATTAGGGGAAATACCGTTTCGTGTCGGCCTAGTGTTCGGCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGTCGGGCCCTCTcc < 3:240406/148‑1 (MQ=21) tAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCtctc < 6:68749/147‑1 (MQ=255) aaTTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATAAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCca < 7:46207/148‑1 (MQ=255) tttCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCTCCACAACAGTTTCAGCGCCTATTAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAg > 8:25339/1‑149 (MQ=255) tCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGc < 2:24418/148‑1 (MQ=255) cAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCcaca < 6:125880/145‑1 (MQ=255) cAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCcaca > 5:125880/1‑145 (MQ=255) aGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTAAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCAtt > 1:212665/1‑149 (MQ=255) aaaGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGc < 4:67060/149‑1 (MQ=255) atatAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCaa < 5:120449/149‑1 (MQ=255) atatAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCaa < 7:4051/149‑1 (MQ=255) ggggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAg < 4:50258/148‑1 (MQ=255) ggggAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAg > 3:50258/1‑148 (MQ=255) cGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAg > 1:334446/1‑149 (MQ=255) tATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGccc < 5:234587/140‑1 (MQ=255) tATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGccc > 6:234587/1‑140 (MQ=255) tCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccc < 7:25339/148‑1 (MQ=255) gggCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAg < 6:246778/131‑1 (MQ=255) gggCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAg > 5:246778/1‑131 (MQ=255) ccAAGTGTTCGCCACTACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCActc > 2:158734/1‑149 (MQ=255) ccAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccacc < 8:52864/143‑1 (MQ=255) ccAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGccccacc > 7:52864/1‑143 (MQ=255) aaGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACtctc < 5:263880/149‑1 (MQ=255) ttCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAAcc > 2:224413/1‑149 (MQ=255) gCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGcc < 6:81544/149‑1 (MQ=255) tCAGCGCCTATGAGATCGAGCGCCGCCCGCGCGGGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGCCAGGCCCTTGGCAGCCCCCCCCCACGCTCAAACCGCCCTACCCTGCTa > 1:46462/1‑149 (MQ=39) ggcgtCTGTGAGATCGAGCGCCGCGCGGGC‑GGCGCTCTATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCt < 7:189587/105‑1 (MQ=37) aGCGCCTATGAGAGCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCt < 2:212665/149‑1 (MQ=255) gaTCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCtt > 8:223163/1‑147 (MQ=255) gaTCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCtt < 7:223163/147‑1 (MQ=255) aTCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTggg < 1:224413/149‑1 (MQ=255) aTCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTggg < 2:46462/149‑1 (MQ=255) cGAGCGCCGCGCGGGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTggg > 6:264140/1‑147 (MQ=255) cGAGCGCCGCGCGGGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTgg < 3:153566/146‑1 (MQ=255) cGAGCGCCGCGCGGGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTgg > 4:153566/1‑146 (MQ=255) gAGCGCCGCGCGGGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAg > 2:81660/1‑149 (MQ=255) aGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAgc < 7:191190/149‑1 (MQ=255) gcgcCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTg > 6:221606/1‑133 (MQ=255) gcgcCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTg < 5:221606/133‑1 (MQ=255) gcccgcGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCcgc < 2:270426/149‑1 (MQ=255) | GTCGCTGGAAGTGGGGCGCATTATAAGGGGATTCGAGAGGGCGTCAACCTTTAATTTCAAGAAAGTGAAATATAAGGGGAAATACCGTATCGGGGCTGCCAAGTGTTCGCCACAACAGTTTCAGCGCCTATGAGATCGAGCGCCGCCCGCGC‑GGCGCTCGATCTCACAGACGCCAGAGAAACAAAGGCGGGCCCTCTCCACAGCCATTGCTATCTCAAGACAGGCCCTTGGCAGCCCCACCCCACTCTCAAACCGCCCTACCCTGCTACCTGGCAACCTTGGGAAGCGCCCGC > NC_002947/5313130‑5313422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |