| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,398,548 | G→A | 6.2% | S520S (TCG→TCA) | hsdS → | type I restriction modification system specificity protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,398,548 | 0 | G | A | 6.2% | 183.8 / 2.1 | 65 | S520S (TCG→TCA) | hsdS | type I restriction modification system specificity protein |
| Reads supporting (aligned to +/- strand): ref base G (29/31); new base A (2/2); total (31/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.99e-01 | |||||||||||
TAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCAAACAGAGCT > NC_002947/5398400‑5398691 | tAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCg > 7:134488/1‑149 (MQ=255) aaTGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCg > 3:195519/1‑148 (MQ=255) aaTGATTTACGACAAGATCATCAGTTTTCATCCTGTTGATCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGTT‑CAATATCTCg < 8:88230/148‑1 (MQ=255) aTGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGATCAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCa < 3:128894/149‑1 (MQ=255) tGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCaa < 4:51651/149‑1 (MQ=255) tCCGCCACGATCATCAGCTCTCCTCCGGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTTCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGTCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGaaa < 4:274293/148‑1 (MQ=255) cGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGc < 6:326118/149‑1 (MQ=255) gACAAGATCATCAGGTTTCATCATGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCt > 8:2130/1‑149 (MQ=255) tcaGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCt > 5:299905/1‑149 (MQ=255) ttCATCCTGTTGAGCTGGGTGTTTATGGTAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATc > 1:195070/1‑149 (MQ=255) cTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGtt < 2:195070/148‑1 (MQ=255) tGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGct < 6:299905/148‑2 (MQ=255) tgtTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGc > 7:273129/1‑123 (MQ=255) tgtTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGc < 8:273129/123‑1 (MQ=255) tttATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGa < 4:244032/148‑1 (MQ=255) aTGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGtt > 4:304907/1‑130 (MQ=255) aTGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGtt < 3:304907/130‑1 (MQ=255) aTGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCaa > 3:171766/1‑149 (MQ=255) tttGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCACAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCg < 4:300060/146‑1 (MQ=255) tttGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCACAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCg > 3:300060/1‑146 (MQ=255) tctTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTgg < 2:184903/101‑1 (MQ=255) tctTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTgg > 1:184903/1‑101 (MQ=255) tttGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAg > 6:246002/1‑149 (MQ=255) gCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCa > 4:256812/1‑113 (MQ=255) gCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCa < 3:256812/113‑1 (MQ=255) gCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTc > 4:183091/1‑149 (MQ=255) gCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACAGCATTGTCACAAAgg > 4:195708/1‑147 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTcc < 2:153491/118‑1 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTcc > 1:153491/1‑118 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGa > 1:315943/1‑149 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCAGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGa > 7:307890/1‑149 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCACAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGa > 3:224113/1‑149 (MQ=255) ttGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGCCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCg > 3:253903/1‑148 (MQ=255) aaCGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGAt > 6:42123/1‑147 (MQ=255) gCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCt > 2:303389/1‑149 (MQ=255) tGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTa > 7:305604/1‑149 (MQ=255) tGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTa > 6:349718/1‑149 (MQ=255) tGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTa > 8:320568/1‑149 (MQ=255) gagaAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTAt < 3:195708/148‑1 (MQ=255) agaAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGa < 3:183091/149‑1 (MQ=255) caaaCTGCCAAAAATCTCGTAAACGCCAACTACGGCAAGGCTGGAACTCATGT‑CAAAATCTCGCAAGAAAAGCTGACTTTGGCTCCGCTCCCGTTCAGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGa < 1:263711/148‑1 (MQ=255) aCTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAAc > 2:171594/1‑148 (MQ=255) cAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGc > 5:157397/1‑148 (MQ=255) aaTATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTa < 3:36746/143‑1 (MQ=255) aaTATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATACCCTT‑AGCACCTCTCCGCGAGCAACACCCCATAGTCACAAAGGTCGATCAGCTAATCAAACTa > 4:36746/1‑143 (MQ=255) atatCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATa < 8:305604/149‑1 (MQ=255) tctcGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACg < 2:315943/148‑1 (MQ=255) gAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGc < 4:171766/145‑1 (MQ=255) aCAGGCCAAGTCCGGCATGGCTGAAAGTCAGGT‑CAATATCTCTCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGc < 1:303389/149‑1 (MQ=255) gCCAAGTCCGGCATGGCTGCAAGTCAGGTGCAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCaa > 1:26236/1‑148 (MQ=255) ccAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCaa > 5:346668/1‑146 (MQ=255) cAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCaa > 5:112205/1‑145 (MQ=255) tCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATaaa < 1:281626/149‑1 (MQ=255) tCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATaaa < 7:320568/149‑1 (MQ=255) ccGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAAt > 2:230200/1‑149 (MQ=255) cGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAAt < 8:134488/148‑1 (MQ=255) cGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAAt < 7:2130/148‑1 (MQ=255) ggCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGt < 5:349718/149‑1 (MQ=255) gCATGGCTGCAAGTCAGGT‑CAATATCTCACAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTa < 4:224113/149‑1 (MQ=255) cAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCgca < 6:112205/147‑1 (MQ=255) tCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTc < 3:146105/140‑1 (MQ=255) tCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTc > 4:146105/1‑140 (MQ=255) ggT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCaaa < 5:42123/149‑1 (MQ=255) t‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCAAACa < 1:171594/149‑1 (MQ=255) aaTATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAAc > 7:274973/1‑118 (MQ=255) aaTATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAAc < 8:274973/118‑1 (MQ=255) aaTATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCAAACaga < 6:157397/149‑1 (MQ=255) tctcGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCAAACAGAGCt < 6:346668/148‑1 (MQ=255) | TAATGATTTCCGACAAGATCATCAGGTTTCATCCTGTTGAGCTGGGTGTTTATGGAAGGTTTGTCGCTCTTTGCTTGAACGCTGGAGAAACTGCCAAATATCTCGAACAGGCCAAGTCCGGCATGGCTGCAAGTCAGGT‑CAATATCTCGCAAGAAAAGCTGAGATTGGCTCCGATCCCGTT‑AGCACCGCTCCGCGAGCAACACCGCATTGTCACAAAGGTCGATCAGCTTATGAAACTATGCGATACGCTAAAGCAACAGATAAATGTAGCTCGCAGCAAGCAAACAGAGCT > NC_002947/5398400‑5398691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |