| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,531,013 | G→T | 11.5% | I420I (ATC→ATA) | braE ← | high‑affinity branched‑chain amino acid ABC transporter permease BraE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,531,013 | 0 | G | T | 11.5% | 195.8 / 13.3 | 69 | I420I (ATC→ATA) | braE | high‑affinity branched‑chain amino acid ABC transporter permease BraE |
| Reads supporting (aligned to +/- strand): ref base G (33/28); new base T (5/3); total (38/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.61e-01 | |||||||||||
ATCTGGTTGCGCCGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGCCCA > NC_002947/5530868‑5531155 | atCTGGTTGCGCCGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGAt > 2:134315/1‑148 (MQ=255) gcgcCGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATCCGTATCAGc‑cgta < 5:108288/148‑4 (MQ=255) gcCGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCAcgcg < 7:114622/149‑1 (MQ=255) ccGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCAcgc < 3:50289/147‑1 (MQ=255) ccGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCAcgc > 4:50289/1‑147 (MQ=255) ttCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGc > 6:186595/1‑146 (MQ=255) ggCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGa‑tca < 5:186595/149‑1 (MQ=255) tCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcag > 4:247521/1‑148 (MQ=255) cGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcagca > 6:311245/1‑149 (MQ=255) gCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcagca < 3:247521/148‑1 (MQ=255) ccTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCATATCGTGGGGTCACACACGTAAGGCTGATAAAGATAAGC‑CCACCCGGTCGCCCGA‑TAATcataagcaccaacagca > 1:280376/1‑149 (MQ=255) cTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACTTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcagcaccatcagcac > 7:112857/1‑149 (MQ=255) cTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGAt < 8:165437/107‑1 (MQ=255) cTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGAt > 7:165437/1‑107 (MQ=255) cTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcagcaccatc > 7:108406/1‑144 (MQ=255) cTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATcatcagcaccatc < 8:108406/144‑1 (MQ=255) cACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAAca < 5:116104/149‑1 (MQ=255) aCCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAAcag > 3:7792/1‑149 (MQ=255) cGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAAcagca < 5:106864/149‑1 (MQ=255) cGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAAcagca > 4:218344/1‑149 (MQ=255) cGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAAcag > 1:230324/1‑147 (MQ=255) aCTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAgcagca < 8:264898/149‑1 (MQ=255) tcatcaGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCgg > 7:159524/1‑148 (MQ=255) aGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCg < 1:134315/149‑1 (MQ=255) ggTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCgg < 6:298587/149‑1 (MQ=255) ggTTGTCGACCGAGAGAAAGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGCTCCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCg < 1:102947/149‑1 (MQ=255) aCCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCACCACGCCGAACAGCACCCCCCGGTACGCGGAGAAGCTg > 4:246493/1‑149 (MQ=255) gagagaATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTgcg > 3:263596/1‑148 (MQ=255) agaATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCgcagc < 3:218344/149‑1 (MQ=255) gaATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCgcagca < 3:75651/149‑1 (MQ=255) gaATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCgcag > 3:144700/1‑147 (MQ=255) taTGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCgcagca < 3:1025/147‑1 (MQ=255) tGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGtt > 1:288669/1‑149 (MQ=255) tcgtcgCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGgc < 8:159524/149‑1 (MQ=255) gtcgCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGgcgc > 7:205777/1‑149 (MQ=255) gtcgCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCACCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGgcg < 2:280376/148‑1 (MQ=255) cgcCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCa > 4:180642/1‑149 (MQ=255) aCTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGaa > 8:196280/1‑149 (MQ=255) tttACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAAcgccg > 3:143634/1‑149 (MQ=255) ttACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGgc < 1:127243/126‑1 (MQ=255) ttACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGgc > 2:127243/1‑126 (MQ=255) aCGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCTAACAGCAGCACGCGGTACTCGGAGAAGCTGCGCAGGAGTTCCGGCGCCACGTTCAGCACGAACgcggcg < 4:7792/148‑1 (MQ=255) cGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGAt < 3:180642/149‑1 (MQ=255) tGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGa < 8:205777/149‑1 (MQ=255) ggggTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGa > 1:172231/1‑148 (MQ=255) ggggTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGa < 2:172231/148‑1 (MQ=255) gggTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGACCAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGAcc < 8:842/149‑1 (MQ=255) gggTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCAccc > 3:33917/1‑87 (MQ=255) gggTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCAccc < 4:33917/87‑1 (MQ=255) gTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCCGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGCACGCCGCGATGccccc > 4:299133/1‑147 (MQ=255) cacCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACAcc > 1:289755/1‑148 (MQ=255) acCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCa > 2:41852/1‑149 (MQ=255) cGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACg > 1:174003/1‑149 (MQ=255) cGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACg > 6:96461/1‑149 (MQ=255) gTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGt < 4:144700/149‑1 (MQ=255) cgtgggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGATTCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACgg > 1:61959/5‑149 (MQ=255) cgtgggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCCGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGt > 1:101746/5‑149 (MQ=255) tACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCa > 8:107758/1‑144 (MQ=255) tACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCa < 7:107758/144‑1 (MQ=255) gtgggCTGATCCGTATCAGC‑CCACGCGGACGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGCTACTCGGAGAACCTGCGCAGCAGTTCCGGCGCCACGGACAGCACGACCGCCGCGATGACCACACCAACGGTc > 4:276422/4‑149 (MQ=38) gggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTc < 1:72850/146‑1 (MQ=255) gggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTc > 2:72850/2‑147 (MQ=255) gggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTc > 3:75470/2‑147 (MQ=255) cGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCgg > 7:53616/1‑82 (MQ=255) cGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCgg < 8:53616/82‑1 (MQ=255) ggCTGATCCGTATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAg < 4:75470/149‑1 (MQ=255) gCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGc < 2:288669/149‑1 (MQ=255) cTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGcc > 4:316219/1‑149 (MQ=255) tGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGcc > 5:20957/1‑148 (MQ=255) ggATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCa < 1:203717/132‑1 (MQ=255) ggATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCa > 2:203717/1‑132 (MQ=255) gATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGCCCa < 6:354199/143‑1 (MQ=255) gATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGCCCa > 5:354199/1‑143 (MQ=255) | ATCTGGTTGCGCCGGACCTTCAGGCTGACGTCGCTGAGCGCCTTGATGCCACCGAACTGCATCATCAGGTTGTCGACCGAGAGAATGATATCGTCGCTCATGGCGCCACTCCTTTACGTGGGGTCACACCGGTACGGCTGATACGGATCAGC‑CCACGCGGTCGCCAGA‑TCATCATCAGCACCATCAGCACGCCGAACAGCAGCACCCGGTACTCGGAGAAGCTGCGCAGCAGTTCCGGCGCCACGGTCAGCACGAACGCCGCGATGACCACACCCACGGTCGAGCCCA > NC_002947/5530868‑5531155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |