| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,612,017 | C→G | 8.9% | R337R (CGC→CGG) ‡ | PP_4931 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,612,017 | 0 | C | G | 8.9% | 271.3 / 14.6 | 90 | R337R (CGC→CGG) ‡ | PP_4931 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (40/42); new base G (3/5); total (43/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.83e-01 | |||||||||||
TGCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGG > NC_002947/5611870‑5612164 | tGCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGcc > 6:40001/1‑149 (MQ=255) ccGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCctg > 1:6335/1‑149 (MQ=255) cagcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCctgctg > 7:243457/1‑149 (MQ=255) gcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt < 2:317155/149‑1 (MQ=255) gcgcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCtggt < 3:254132/149‑1 (MQ=255) cgcagAAGGAAAGCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGGCGCTGCtggtc < 5:241294/149‑2 (MQ=255) gcagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGGCGCTGCtggtcg < 8:209171/149‑3 (MQ=255) cagAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTggg > 2:173324/1‑149 (MQ=255) agAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGc > 5:216467/1‑149 (MQ=255) aGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTg < 6:297312/148‑1 (MQ=255) aaTCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGa > 1:254141/1‑149 (MQ=255) aTCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGAc > 8:304558/1‑149 (MQ=255) tCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGAcc < 8:243457/149‑1 (MQ=255) aCAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCaaa > 6:188679/1‑149 (MQ=255) ccTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactgg > 8:246499/1‑149 (MQ=255) tgcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAactggcactg > 3:85242/1‑149 (MQ=255) gcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGc < 7:170970/131‑1 (MQ=255) gcCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGc > 8:170970/1‑131 (MQ=255) cATGGGTCGATCAGAGCCTGGTGCGCTGTGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAActggcactggca < 3:28961/149‑1 (MQ=255) cATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAActggcactggca > 2:9216/1‑149 (MQ=255) tGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAc‑c < 8:41109/149‑1 (MQ=255) gggTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTgg < 1:172528/125‑1 (MQ=255) gggTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTgg > 2:172528/1‑125 (MQ=255) gggTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑Cg > 3:198098/1‑149 (MQ=255) gTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGa < 1:173324/149‑1 (MQ=255) tCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAc‑c > 5:202993/1‑145 (MQ=255) tCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAc‑c < 6:202993/145‑1 (MQ=255) tCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCa < 5:188679/149‑1 (MQ=255) tCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCa < 7:304558/149‑1 (MQ=255) ggTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACtggcactggcac < 5:233450/131‑1 (MQ=255) ggTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACtggcactggcac > 6:233450/1‑131 (MQ=255) gTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCggg < 4:85242/148‑1 (MQ=255) tGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTa < 7:246499/149‑1 (MQ=255) cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAAt > 1:215073/1‑147 (MQ=255) cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCa < 2:215073/149‑1 (MQ=255) cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCa < 2:254141/149‑1 (MQ=255) cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCa < 4:198098/149‑1 (MQ=255) cTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCa < 1:316563/149‑1 (MQ=255) tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAg > 6:12830/1‑149 (MQ=255) tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAg > 5:188426/1‑149 (MQ=255) tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTCGGcaagg > 7:268784/1‑99 (MQ=37) tGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTCGGcaagg < 8:268784/103‑5 (MQ=37) ccACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCAc > 2:229005/1‑149 (MQ=255) acTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTg > 6:192114/1‑148 (MQ=255) tGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACATCAGCGACCGGGTAATCAGCCACCTGGAg > 2:346736/1‑149 (MQ=255) tCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGAc < 6:188426/149‑1 (MQ=255) gACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACg < 1:229005/148‑1 (MQ=255) ccGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑TGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCa > 3:236658/1‑149 (MQ=255) tGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCt < 6:104151/129‑1 (MQ=255) tGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCt > 5:104151/1‑129 (MQ=255) tGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTc > 2:336951/1‑149 (MQ=255) aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTcc < 5:192114/148‑1 (MQ=255) aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTc < 2:6335/147‑1 (MQ=255) aGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCca < 6:216467/149‑1 (MQ=255) cTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGa < 6:3518/97‑1 (MQ=255) cTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCCACCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGa > 5:3518/1‑97 (MQ=255) cacaATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCACTCGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCAt < 1:76730/137‑1 (MQ=255) cacaATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCAt > 2:76730/1‑136 (MQ=255) acaATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGcac < 1:336951/149‑1 (MQ=255) caATCCGGCCTGGCCCGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCAATGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGca > 8:236905/1‑147 (MQ=255) aaTCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAg > 4:23698/1‑149 (MQ=255) aTCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAgg < 5:40001/149‑1 (MQ=255) tCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACAGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGc > 4:59833/1‑149 (MQ=255) tCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCACCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGACACCTGGAGCGCGACGGCATTCGTACACAAGCACAgga > 2:186738/1‑148 (MQ=255) cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTc < 6:53516/134‑1 (MQ=255) cGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTc > 5:53516/1‑134 (MQ=255) ggCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGt < 8:124384/132‑1 (MQ=255) ggCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGt > 7:124384/1‑132 (MQ=255) ccTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGAcc < 1:82457/149‑1 (MQ=255) cTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCt > 3:138100/1‑149 (MQ=255) tGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTg > 6:186876/1‑110 (MQ=255) tGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTg < 5:186876/110‑1 (MQ=255) cGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑TGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccga < 4:236658/149‑1 (MQ=255) cGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTgaccga < 3:23698/149‑1 (MQ=255) cAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCAc < 1:163763/149‑1 (MQ=255) cAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCAc < 5:12830/149‑1 (MQ=255) aaCGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGt > 3:257853/1‑114 (MQ=255) aaCGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGt < 4:257853/114‑1 (MQ=255) gCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCcac > 6:85500/1‑115 (MQ=255) gCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCcac < 5:85500/115‑1 (MQ=255) cttccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCGGCGAGCggg < 4:81732/77‑1 (MQ=255) cttccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCGGCGACCggg > 3:81732/1‑77 (MQ=255) tccttGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCg > 3:25875/1‑149 (MQ=255) ccGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAg < 6:9619/113‑1 (MQ=255) ccGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAg > 5:9619/1‑113 (MQ=255) ccGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGc < 1:9216/149‑1 (MQ=255) caCCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGAcc < 1:239619/117‑1 (MQ=255) caCCAGCAGGCGCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGAcc > 2:239619/2‑118 (MQ=255) gcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCTTTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTCGGcatcacgg > 8:288720/1‑142 (MQ=255) gcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACg > 8:235041/1‑129 (MQ=255) gcagcGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACg < 7:235041/129‑1 (MQ=255) gcgcCTGCTGGTGGGCTGGCCGACCAATCTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCt > 6:41350/1‑149 (MQ=255) gcgcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACg > 2:93084/1‑83 (MQ=255) gcgcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACg < 1:93084/83‑1 (MQ=255) gcCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTgg < 2:18228/149‑1 (MQ=255) | TGCCGCAGCGCAGAAGGAAATCGACAACCTGCTGCCATGGGTCGATCAGAGCCTGGTGCGCTGGGCCACACTGCGCGTCGACCGCGCTGAGCCTGCACAATCCGGCCTGGCACGCCCGGACAACGCCTTCCTTGCCGACCAGCAGCGCCTGCTGGTGGGCTGGCCGACCAAACTGGCACTGGCAC‑CGGACTTCAGCGACCGGGTAATCAGCCACCTGGAGCGCGACGGCATTCGTCCACAAGCACAGGCCGACCTGACCGACCTGCCACGCCCTCCGCTGGGCGTACCGGCCTGG > NC_002947/5611870‑5612164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |