| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,682,324 | A→C | 7.0% | R1523R (CGT→CGG) | PP_4988 ← | signal transduction histidine kinase CheA/CheY‑like receiver |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,682,324 | 0 | A | C | 7.0% | 215.1 / 6.6 | 71 | R1523R (CGT→CGG) | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver |
| Reads supporting (aligned to +/- strand): ref base A (31/35); new base C (2/3); total (33/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
ACGTCGGGCCGGTGCTCTTCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCG > NC_002947/5682181‑5682471 | acGTCGGGCCGGTGCTCTTCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCAcggcg > 3:213711/1‑149 (MQ=255) cGTCGGGCCGGTGCTCTTCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCAcggcgc < 1:293352/149‑1 (MQ=255) gCCGGTGCTCTTCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGC‑‑ACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCgg > 3:173032/1‑149 (MQ=255) gtgttctctTCCAGCAGGGCCATGGCATCTACACCTTCGTTGGCCGTAAGAAGGCTCATGCCGTGGCGCTGCAGCAGGCGGCG‑GGTTACGTTGCGTACGGTTACCGAATGGTCCACGACCTTCTCCAGAAAGGCCCGGcgccgcgccgt < 4:40556/144‑2 (MQ=255) ttCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCCCGGCGCCGCGCCGTGccttg < 7:98902/147‑4 (MQ=255) ccAGCAGGGCCATGGCATCTACTCCATCCTTGGCCGTAAGCACGCGCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCaa < 7:137451/148‑1 (MQ=255) agcagGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGACTAGTCCACCACCATCCCCAGAAAGGCACGGCGCGGCGCCGGGCCAAGCAACTg > 6:271495/1‑149 (MQ=255) agcagGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTg < 4:23710/149‑1 (MQ=255) cagGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCCCGGCGCCGCGCCGTGc > 3:140121/1‑137 (MQ=255) cagGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCCCGGCGCCGCGCCGTGc < 4:140121/137‑1 (MQ=255) ggCCATGGCATCTACACCATCGTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGt < 2:146219/148‑1 (MQ=255) ggCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCgg > 7:21594/1‑132 (MQ=255) ggCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCgg < 8:21594/132‑1 (MQ=255) ggCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGtt < 7:80586/149‑1 (MQ=255) acATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTgg < 6:333902/148‑1 (MQ=255) cATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGc < 1:142191/149‑1 (MQ=255) gCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTAcc < 5:162650/149‑1 (MQ=255) cTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCACCTGGCGTTGGCTAGCggcc > 8:75407/1‑146 (MQ=255) cTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGcca > 7:236987/1‑149 (MQ=255) cacCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGc < 2:322360/120‑1 (MQ=255) cacCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGc > 1:322360/1‑120 (MQ=255) cacCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGC‑‑ACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGGTAGCCAACGccagttgc < 4:173032/149‑6 (MQ=255) acCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAg > 8:132368/1‑149 (MQ=255) cATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTg < 5:43976/133‑1 (MQ=255) cATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTg > 6:43976/1‑133 (MQ=255) aTCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGc > 2:117667/1‑148 (MQ=255) tCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCTGGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATTACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGc > 1:81635/1‑148 (MQ=255) tCCTTGGCCGTAAGCACGCTCAAGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCaa < 7:145565/149‑1 (MQ=255) ttGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGt < 3:7072/126‑1 (MQ=255) ttGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGt > 4:7072/1‑126 (MQ=255) gCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATTACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGc < 2:81635/149‑1 (MQ=255) gCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGccacc > 6:290854/1‑137 (MQ=255) gCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGccacc < 5:290854/137‑1 (MQ=255) gCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGc > 1:112815/1‑149 (MQ=255) tAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGc < 1:117667/149‑1 (MQ=255) aaGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGcc > 8:317627/1‑149 (MQ=255) gCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGt > 2:282039/1‑149 (MQ=255) aCGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAgg > 5:126905/1‑131 (MQ=255) aCGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAgg < 6:126905/131‑1 (MQ=255) cGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCgc < 1:255619/149‑1 (MQ=255) gCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAgg < 8:160764/129‑1 (MQ=255) gCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAgg > 7:160764/1‑129 (MQ=255) aTGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCgctgc < 1:29345/147‑1 (MQ=255) ccGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCTGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGc < 5:271495/148‑1 (MQ=255) cTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCt > 5:268145/1‑149 (MQ=255) cTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCt > 2:168905/1‑149 (MQ=255) cagcagGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGc > 4:105412/1‑112 (MQ=255) cagcagGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGc < 3:105412/112‑1 (MQ=255) cggcT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCcagcag < 6:330285/149‑1 (MQ=255) ggTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCcagcag < 6:349040/144‑1 (MQ=255) ggTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCcagcag > 5:349040/1‑144 (MQ=255) ggTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTc > 6:117199/1‑147 (MQ=255) gTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCaa < 6:136519/148‑1 (MQ=255) gTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCa < 4:213711/147‑1 (MQ=255) aCCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCgcgc > 8:280252/1‑126 (MQ=255) aCCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCgcgc < 7:280252/126‑1 (MQ=255) ttGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAg > 1:126197/1‑149 (MQ=255) cGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGcac < 8:236987/149‑1 (MQ=255) ggTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCAccc > 2:90056/1‑149 (MQ=255) ttACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCgg < 6:268145/149‑1 (MQ=255) aaTCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCca < 5:261634/117‑1 (MQ=255) aaTCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCca > 6:261634/1‑117 (MQ=255) gTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGGGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGccc < 1:282039/148‑1 (MQ=255) gTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGTACCACCCGGCCATCGccc < 2:126197/148‑1 (MQ=255) gTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGccc < 2:112815/148‑1 (MQ=255) accaccaTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCcagcag > 6:174842/1‑149 (MQ=255) caTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCg > 2:167356/1‑149 (MQ=255) cACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGACGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGacc > 6:138420/1‑149 (MQ=255) ttggCCCGGCGCCGCGCCGTGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATaa > 7:100555/3‑149 (MQ=255) gCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAAccc > 1:83748/1‑149 (MQ=255) cACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCg < 7:317627/149‑1 (MQ=255) | ACGTCGGGCCGGTGCTCTTCCAGCAGGGCCATGGCATCTACACCATCCTTGGCCGTAAGCACGCTCATGCCGTGGCGCTCCAGCAGGCGGCT‑GGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCGCAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCG > NC_002947/5682181‑5682471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |