Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,684,794 | C→T | 6.8% | S700N (AGC→AAC) | PP_4988 ← | signal transduction histidine kinase CheA/CheY‑like receiver |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,684,794 | 0 | C | T | 6.8% | 175.0 / 2.5 | 59 | S700N (AGC→AAC) | PP_4988 | signal transduction histidine kinase CheA/CheY‑like receiver |
Reads supporting (aligned to +/- strand): ref base C (26/29); new base T (2/2); total (28/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
CAGAGCGTCACGCTGGCCGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTT > NC_002947/5684646‑5684941 | cAGAGCGTCACGCTGGCCGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGc > 4:200482/1‑149 (MQ=255) cAGAGCGTCACGCTGGCCGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGc > 7:254302/1‑149 (MQ=255) cGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTcc < 2:108989/149‑1 (MQ=255) cGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGCTcc < 3:200482/149‑1 (MQ=255) gCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACg > 3:215457/1‑149 (MQ=255) cTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACgg < 4:335568/149‑1 (MQ=255) tGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGc < 4:7916/149‑1 (MQ=255) tgctgcCAGCGCGACAACAACGTCTCTGGCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGATGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGAAGGCt > 1:196035/1‑126 (MQ=255) tgctgcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCt < 2:196035/125‑1 (MQ=255) ctgcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGc > 6:126917/1‑149 (MQ=255) tgcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGTTGGCCAGGCCGTGGACCGCCGCCTgg < 7:244608/147‑1 (MQ=255) tgcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGTTGGCCAGGCCGTGGACCGCCGCCTgg > 8:244608/1‑147 (MQ=255) gcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTgg < 3:242364/146‑1 (MQ=255) gcCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTgg > 4:242364/1‑146 (MQ=255) cAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAAc < 5:126917/149‑1 (MQ=255) aGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAAcc > 2:192977/1‑149 (MQ=255) gcgcGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCt < 8:254302/149‑1 (MQ=255) aacaacGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGAt < 4:93695/149‑1 (MQ=255) aacGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGTTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAg > 6:296342/1‑149 (MQ=255) gTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGAt < 2:181382/143‑1 (MQ=255) gTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGAt > 1:181382/1‑143 (MQ=255) tctcT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTcc > 4:279079/1‑149 (MQ=255) cATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCa > 4:203932/1‑149 (MQ=255) aTCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAAcc > 3:151486/1‑127 (MQ=255) aTCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAAcc < 4:151486/127‑1 (MQ=255) aTCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCAc > 3:236431/1‑149 (MQ=255) tCGAGCAGGATGTCCATGGCATCGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTAGCTGCGGCCCGCATGGTGCCGCTCTTCATGCAGCCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTACCGCGGCAcc > 4:239260/1‑149 (MQ=255) gAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCg < 4:236431/148‑1 (MQ=255) ccATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATggcggtg > 1:294590/1‑147 (MQ=255) catggcatggGCCAGGAAGCTGGCGACCCACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCaca > 6:292045/1‑109 (MQ=255) catggcatggGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCa < 8:68673/149‑1 (MQ=255) gcatggGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAggg < 6:26472/148‑1 (MQ=255) atggGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCg > 2:124282/1‑149 (MQ=255) aGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTCGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATc > 8:103414/1‑149 (MQ=255) gAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGa < 8:111577/149‑1 (MQ=255) cGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTgcgc > 1:56216/1‑148 (MQ=255) gACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGt < 7:131071/142‑1 (MQ=255) gACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGt > 8:131071/1‑142 (MQ=255) gACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGcc > 8:224972/1‑148 (MQ=255) aCCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCaa < 1:124282/149‑1 (MQ=255) cAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGc < 2:294590/149‑1 (MQ=255) cTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCTACCTGCTCGATCAGTTCCGCGGCACCg < 1:185638/106‑1 (MQ=255) cTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCg > 2:185638/1‑106 (MQ=255) cGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGa < 3:203932/148‑1 (MQ=255) cGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGAt < 1:192977/149‑1 (MQ=255) ggATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATg < 2:490/149‑1 (MQ=255) gATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGcc < 6:206581/142‑1 (MQ=255) gATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGcc > 5:206581/1‑142 (MQ=255) gATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATgg < 7:103414/149‑1 (MQ=255) gATCACGCTAGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATg > 4:167121/1‑148 (MQ=255) cTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaa < 7:180110/144‑1 (MQ=255) cTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGaa > 8:180110/1‑144 (MQ=255) ggccggcATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCa < 7:224972/149‑1 (MQ=255) ggccggcATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCa < 2:56216/149‑1 (MQ=255) ggTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGc > 1:260492/1‑149 (MQ=255) ggTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGccattc > 2:95101/1‑148 (MQ=255) cATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCAttt < 2:260492/147‑1 (MQ=255) cATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTc < 3:167121/148‑1 (MQ=255) aTGCAGGTTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCg < 5:296342/148‑1 (MQ=255) aGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCAt > 8:266724/1‑149 (MQ=255) gCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCAttt > 5:52455/1‑149 (MQ=255) | CAGAGCGTCACGCTGGCCGGGCTGTTGCTGCCAGCGCGACAACAACGTCTCT‑GCATCGAGCAGGATGTCCATGGCATGGGCCAGGAAGCTGGCGACCAACTGCGGATCACGCTTGCTGCGGCCGGCATGGTGCGGGTCTTCATGCAGGCTGGCCAGGCGGCGGTCCACGGCCTGGCCAACCTGCTCGATCAGTTCCGCGGCACCGGGGATGGCGGCCAGGGGCGTGCTATCGAGTTGCGCCAAGCCCAGATGGAACAACGACCGCGCAGCCTCCAGCCATTCCATTTCGGCCATTT > NC_002947/5684646‑5684941 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |