| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,704,535 | G→A | 6.5% | intergenic (+60/+52) | PP_5006 → / ← PP_5007 | TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,704,535 | 0 | G | A | 6.5% | 217.5 / 4.4 | 77 | intergenic (+60/+52) | PP_5006/PP_5007 | TetR family transcriptional regulator/polyhydroxyalkanoate granule‑associated protein GA2 |
| Reads supporting (aligned to +/- strand): ref base G (36/35); new base A (3/2); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.39e-01 | |||||||||||
AGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAG > NC_002947/5704390‑5704672 | aGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGttt > 6:348253/1‑149 (MQ=255) ggTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTg > 7:9460/1‑149 (MQ=255) ggTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTg > 1:60622/1‑149 (MQ=255) gTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTg < 5:227787/148‑1 (MQ=255) gatgatGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCGACAAGGGTTGgcg > 8:252173/1‑149 (MQ=255) cTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTg < 6:138932/149‑1 (MQ=255) gtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGGTCCTACAAGGTTTGGCGCATCTTGTa < 3:298757/148‑1 (MQ=255) gtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTa < 4:171592/148‑1 (MQ=255) gtggCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAg < 8:193651/149‑1 (MQ=255) gccgcATATGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACATGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCATACTCGGTGTGGCGCATAGTGTATGcgcg > 6:214439/1‑149 (MQ=255) aTCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTAAAAGGTTTTGCGCATCTTGTAGGAGCGGGtt > 3:123970/1‑148 (MQ=255) tCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACGAGGTTTGGCGCATCTTGTAGGAGCGGGTTTa > 7:243584/1‑149 (MQ=255) tCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGCGCGGGttt > 5:197949/1‑148 (MQ=255) gCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTAccc > 4:28348/1‑149 (MQ=255) gcccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCcgcg > 2:88707/1‑148 (MQ=255) gcccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCga < 3:59082/149‑1 (MQ=255) gcccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCga < 7:169086/149‑1 (MQ=25) ccaggcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCcgcg > 6:120684/1‑146 (MQ=255) gcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAgg > 4:245869/1‑149 (MQ=255) gcccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAgg > 6:282625/1‑149 (MQ=255) ccGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCg < 5:282625/149‑1 (MQ=255) gggCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTTAACCCCCTCCAACAAGGTTTGGCGCATCATGTAGGAGCCGGGTTACCCGCGAAGAAAGCGat > 4:168465/1‑148 (MQ=255) cggcggcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGAcgcg < 1:88707/149‑1 (MQ=255) ggcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTat > 7:162677/1‑149 (MQ=255) ggcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTat > 6:137490/1‑149 (MQ=255) gcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatc < 8:9460/149‑1 (MQ=255) gcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatc < 2:60622/149‑1 (MQ=255) gcggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatc < 5:137490/149‑1 (MQ=255) ggAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGTTGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTat > 1:241803/1‑146 (MQ=255) agcTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTatcagatcag < 3:245869/149‑1 (MQ=255) gcTGGCAGTTAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGAATTCGCGGTTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGATGCGGTATCAGATCAgg < 3:168465/149‑1 (MQ=255) gcTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAgg < 6:197949/149‑1 (MQ=255) gCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCg < 4:314714/127‑1 (MQ=255) gTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCgg > 6:72230/1‑149 (MQ=255) gTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTAGTAGGAGCGGGTTTACCAGCGAAGAAGGCGACGCGGTATCAGATCAAGGTACCgg > 7:248790/1‑149 (MQ=255) taaGTACCTGGAGGGGTAGTCCTGCTGGATATGTTGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACACGCGAAGAAGGCGACGCGGTATCAGATCAgg < 6:122917/139‑1 (MQ=255) gAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACACGCGAAGAAGGCGACGCGGTATCAGATCAgg > 5:122917/1‑140 (MQ=255) aaGTCCCGGGAGGGGTAGGCCGGCTGGAGAGGTAGGGTTGCAGCCGCCGCATTCGCGGGTAAACCCGCTCCTACACGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGc < 8:243584/149‑1 (MQ=38) tttACCTGGTGGGTTCGGCGTGGTGTATATTTAGTGTTGCTGCCGACGCATTGGGGTGTAAACCGGCTCATACAAGGTTTGGCGCATGTTGTAGTAGGGGGTTTACCGGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGc < 1:339933/146‑1 (MQ=255) aGTACCTGGAGGGGTAGGCCTGGTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATGAGATCAGGGTACCGGTGc < 8:259932/148‑1 (MQ=255) ccTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTAc > 7:73078/1‑102 (MQ=255) ccTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTAc < 8:73078/102‑1 (MQ=255) ggAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAgg > 6:13186/1‑111 (MQ=255) ggAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAgg < 5:13186/111‑1 (MQ=255) ggAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCCCTCCTAAAACCTTTGGCGCAAATTGTTTGAGGGGGGTTTACCGCGGAGAAGGCCCCGCGGGTTAAGATGAGGGGACAGGGGCCAGTAggg > 4:174801/1‑148 (MQ=255) gAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGt < 3:237743/148‑1 (MQ=255) gTAGGCCTGCTGGAGTTGTAGTGTTGCAGCCGTCGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACGCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGAc < 7:306597/149‑1 (MQ=255) ccTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCg > 5:351335/1‑126 (MQ=255) ccTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCg < 6:351335/126‑1 (MQ=255) ctgctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtg < 2:241803/149‑1 (MQ=255) ctgctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtg > 3:259406/1‑149 (MQ=255) ctgctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtg > 3:303830/1‑149 (MQ=255) tgctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAAACCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtgc > 1:188688/1‑149 (MQ=255) ctgGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGtgctg > 1:229029/1‑149 (MQ=255) gatctttAGTGATGCAGCGTACGCATTCTCGGGTAAACCCTCTCATAGAAGGTTTTGCGCATCTTGTTGGTGCGTGTTTACCCGCGAAGAAGGCGACGCGTTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGctgctg < 4:123369/143‑1 (MQ=255) gaTGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGc > 3:265442/1‑149 (MQ=255) tAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATGAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGctgctg > 3:123369/1‑143 (MQ=255) acgggtTGCCCCCGACGCATTCGCGGGTAACCCCGCTCCTACAAGGTTTGGCCCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCgg < 1:336772/144‑1 (MQ=39) ttGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGGATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggc > 5:342391/1‑149 (MQ=255) gCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg > 8:102365/1‑149 (MQ=255) gCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg < 4:123970/149‑1 (MQ=255) gCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg > 8:266255/1‑149 (MQ=255) gCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGAGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg < 3:28348/149‑1 (MQ=255) gCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCAGCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCg < 7:252173/149‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTg < 4:259406/149‑1 (MQ=255) gcgGGTAAACCCGCTCCTACACGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCtg < 8:291309/149‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCtg > 7:291309/1‑149 (MQ=255) gggTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCtgtg < 4:303830/149‑1 (MQ=255) gggTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCtgtg > 2:16611/1‑149 (MQ=255) aCCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCt > 1:223791/1‑149 (MQ=255) ccGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGc < 5:120684/149‑1 (MQ=255) ccGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGc > 7:220090/1‑137 (MQ=37) ccGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGc < 8:220090/137‑1 (MQ=37) ccGCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTg > 6:70834/1‑148 (MQ=37) gCTCCTACAAGATGCGCCAAACCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAg > 4:322903/1‑149 (MQ=38) cAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggcggc > 3:337614/1‑116 (MQ=255) cAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTggcggc < 4:337614/116‑1 (MQ=255) | AGGTGATGATGCTGGTGGCGCCGCATCTGCAGGCCCAGGCCCGGGCGGCGGCGGAGCAGCTGGCAGTGAAGTACCTGGAGGGGTAGGCCTGCTGGAGATGTAGTGTTGCAGCCGACGCATTCGCGGGTAAACCCGCTCCTACAAGGTTTGGCGCATCTTGTAGGAGCGGGTTTACCCGCGAAGAAGGCGACGCGGTATCAGATCAGGGTACCGGTGCCAGTCGGTGCCGACGGCGTGCTGCTGGCCGGGGTGGCGGCAGTTGCCGGTGCTGTGGTCGCTGCAG > NC_002947/5704390‑5704672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |