Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,795,436 C→G 5.6% D822H (GAC→CAC)  gltB ← L‑glutamate synthase subunit alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,795,4360CG 5.6% 291.2 / 5.7 89D822H (GAC→CAC) gltBL‑glutamate synthase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (41/43);  new base G (2/3);  total (43/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

GCGACAGTGCACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCG  >  NC_002947/5795295‑5795582
                                                                                                                                              |                                                                                                                                                   
gCGACAGTGCACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGc                                                                                                                                              >  7:200170/1‑149 (MQ=255)
   aCAGTGCACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTGGACCAGCgcc                                                                                                                                           <  5:293390/149‑3 (MQ=255)
   aCAGTGCACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCgtg                                                                                                                                           <  8:219314/149‑1 (MQ=255)
         cACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTAt                                                                                                                                     >  1:309944/1‑149 (MQ=255)
            ccAGCGAGATACCCGCCGAGTCGAAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCAGTTTCCCCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGGGTATTc                                                                                                                                   >  7:46704/1‑149 (MQ=255)
            ccAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTcc                                                                                                                                  <  5:110152/149‑1 (MQ=255)
             cAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCt                                                                                                                                 <  1:248100/149‑1 (MQ=255)
              aGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCtt                                                                                                                                >  4:160551/1‑149 (MQ=255)
              aGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCtt                                                                                                                                <  1:253600/149‑1 (MQ=255)
               gCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTg                                                                                                                               <  4:218183/149‑1 (MQ=255)
                cGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGa                                                                                                                              <  3:191015/149‑1 (MQ=255)
                cGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGa                                                                                                                              <  1:69517/149‑1 (MQ=255)
                      aCCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTgg                                                                                                                        >  3:224030/1‑149 (MQ=255)
                      aCCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCATGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTCGTGTATTCCTTGAACTTgg                                                                                                                        >  5:290532/1‑149 (MQ=255)
                       cccGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGc                                                                                                                       <  3:72023/149‑1 (MQ=255)
                        ccgccgAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCg                                                                                                                      >  8:234281/1‑149 (MQ=255)
                        ccgccgAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCg                                                                                                                      >  2:158035/1‑149 (MQ=255)
                        ccgccgAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCg                                                                                                                      <  8:46704/149‑1 (MQ=255)
                                 cGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGccc                                                                                                             >  8:224566/1‑149 (MQ=255)
                                    ataggCTTGAGCATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCGACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCctg                                                                                                           <  6:290532/145‑1 (MQ=255)
                                    aaaCGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCctg                                                                                                           <  7:234281/149‑1 (MQ=255)
                                          ttGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGca                                                                                                      >  8:132792/1‑148 (MQ=255)
                                          ttGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGca                                                                                                      >  2:234765/1‑148 (MQ=255)
                                             agaATCCCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGACTCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGc                                                                                                  <  6:145110/149‑1 (MQ=255)
                                                 tCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCt                                                                                              >  8:302015/1‑149 (MQ=255)
                                                     cTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCa                                                                                          <  6:226685/149‑1 (MQ=255)
                                                     cTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCa                                                                                          <  7:302015/149‑1 (MQ=255)
                                                       ccAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAgg                                                                                        >  1:257238/1‑149 (MQ=255)
                                                        cAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAgg                                                                                        <  2:309944/148‑1 (MQ=255)
                                                          gCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGgtg                                                                                     <  4:224030/149‑1 (MQ=255)
                                                             gCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTg                                                                                  <  7:132792/149‑1 (MQ=255)
                                                              cTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGa                                                                                 <  1:158035/149‑1 (MQ=255)
                                                                 gACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGAcc                                                                               <  1:234765/148‑1 (MQ=255)
                                                                  aCCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCAc                                                                             >  6:249410/1‑149 (MQ=255)
                                                                    cTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTccac                                                                                                                                                  >  6:228381/1‑78 (MQ=255)
                                                                      gCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTcc                                                                         >  6:166583/1‑149 (MQ=255)
                                                                          cagcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCggg                                                                      <  3:46370/148‑1 (MQ=255)
                                                                          cagcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGt                                                                     >  3:312176/1‑149 (MQ=255)
                                                                          cagcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGt                                                                     >  5:113402/1‑149 (MQ=255)
                                                                          cagcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGt                                                                     >  5:66706/1‑149 (MQ=255)
                                                                           agcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGtt                                                                    <  1:183146/149‑1 (MQ=255)
                                                                            gcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTg                                                                   <  6:66706/149‑1 (MQ=255)
                                                                            gcgccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTg                                                                   >  7:204636/1‑149 (MQ=255)
                                                                               ccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGt                                                                     >  7:48038/1‑144 (MQ=255)
                                                                               ccagcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGt                                                                     <  8:48038/144‑1 (MQ=255)
                                                                                 agcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGc                                                              <  2:257238/149‑1 (MQ=255)
                                                                                  gcgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCg                                                             <  7:224566/149‑1 (MQ=255)
                                                                                  gcgGCTGGTCGGCAACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACATGGCGTACTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCg                                                             >  2:228816/1‑149 (MQ=255)
                                                                                   cgGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGt                                                            <  5:249410/149‑1 (MQ=255)
                                                                                              gcACTTTTACCTTGAGCAAGTCACGAATCATCGACTCCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTTATCTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGgtg                                                                                     <  2:147148/112‑1 (MQ=255)
                                                                                              ccACTTTTACCTTGAGCAAGTCACGAATCATAGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGAGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGgtg                                                                                     >  1:147148/1‑113 (MQ=255)
                                                                                               cACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCa                                                <  3:268653/148‑1 (MQ=255)
                                                                                               cACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCa                                                >  4:268653/1‑148 (MQ=255)
                                                                                               cACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCAc                                               >  2:156350/1‑149 (MQ=255)
                                                                                               cACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCAc                                               >  2:1373/1‑149 (MQ=255)
                                                                                                  tttCACCTTGAGCAAGTCACGAATAATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGt                                            >  3:213049/1‑149 (MQ=255)
                                                                                                   ttCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTg                                           >  2:177626/1‑149 (MQ=255)
                                                                                                    tCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTg                                           >  4:34381/1‑148 (MQ=255)
                                                                                                      aCCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCa                                                >  2:206819/1‑141 (MQ=255)
                                                                                                      aCCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCa                                                <  1:206819/141‑1 (MQ=255)
                                                                                                        cTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACg                                       >  3:27325/1‑148 (MQ=255)
                                                                                                        cTTGAGCAAGTCACGAATCATCGACACCGGCCGCTCGTCCACCAGCGTGGTGTATTCCATGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTCCAGGGTGTTGACCACGTCCGGCTTGTAGGCGAGGTAATCGCCACCGTGGACg                                       >  4:244529/1‑148 (MQ=255)
                                                                                                           gAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAAc                                    <  1:216003/148‑1 (MQ=255)
                                                                                                              cAAGTCACGAATCATCGACACCGGGCGGTCGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTc                                 <  3:244529/148‑1 (MQ=255)
                                                                                                                  tCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTc                                                                                                                 >  7:123805/1‑65 (MQ=255)
                                                                                                                  tCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTc                                                                                                                 <  8:123805/65‑1 (MQ=255)
                                                                                                                   cACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTg                                           <  7:55713/133‑1 (MQ=255)
                                                                                                                   cACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTg                                           >  8:55713/1‑133 (MQ=255)
                                                                                                                    aCGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGt                                                                  <  8:14087/110‑1 (MQ=255)
                                                                                                                    aCGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGt                                                                  >  7:14087/1‑110 (MQ=255)
                                                                                                                    aCGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGc                          >  8:216615/1‑149 (MQ=255)
                                                                                                                     cGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCCGCCACCGTGGACGAACTTCAGCAGGc                          <  1:177626/149‑1 (MQ=255)
                                                                                                                           atcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGt                                                            <  4:235801/109‑1 (MQ=255)
                                                                                                                           atcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGt                                                            >  3:235801/1‑109 (MQ=255)
                                                                                                                            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTc                                                    >  2:152259/1‑115 (MQ=255)
                                                                                                                            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTc                                                    <  1:152259/115‑1 (MQ=255)
                                                                                                                            tcGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGc                  <  1:156350/149‑1 (MQ=255)
                                                                                                                              gACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCt                 <  4:312176/148‑1 (MQ=255)
                                                                                                                                  ccGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATc            <  1:1373/149‑1 (MQ=255)
                                                                                                                                   cGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCg           >  2:156659/1‑149 (MQ=255)
                                                                                                                                    ccacgcTGGTGGACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCgg          >  8:221050/4‑149 (MQ=255)
                                                                                                                                     cacgcTGGTGGACCAGTGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGaa                                     >  3:23456/3‑121 (MQ=255)
                                                                                                                                     cacgcTGGTGGACCAGTGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGaa                                     <  4:23456/119‑1 (MQ=255)
                                                                                                                                         cTGGTGGACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgc     <  7:221050/149‑1 (MQ=255)
                                                                                                                                         cTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgc     <  5:166583/149‑1 (MQ=255)
                                                                                                                                          tGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCgg          >  3:97449/1‑143 (MQ=255)
                                                                                                                                          tGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCgg          <  4:97449/143‑1 (MQ=255)
                                                                                                                                           ggTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgcgc   <  3:34381/149‑1 (MQ=255)
                                                                                                                                            gTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgcgcg  >  8:24331/1‑149 (MQ=255)
                                                                                                                                            gTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTgcgcg  >  6:64285/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
GCGACAGTGCACCCAGCGAGATACCCGCCGAGTCGAAACGCTTGAGAATCGCCTCCAGCGGCTCGACCTGCTCCAGCGCCAGCGGCTGGTCGGCCACTTTCACCTTGAGCAAGTCACGAATCATCGACACCGGGCGCTGGTCCACCAGCGTGGTGTATTCCTTGAACTTGGCGTAGTCGCCCTGCTGCACAGCCGCTTGCAGGGTGTTGACCACGTCCGGGTTGTAGGCGTGGTATTCGCCACCGTGGACGAACTTCAGCAGGCCACCTTGCTGGATCGGCTTGCGCG  >  NC_002947/5795295‑5795582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: