| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,914,126 | C→G | 10.2% | intergenic (+18/+135) | spuI → / ← argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,914,126 | 0 | C | G | 10.2% | 224.2 / 10.5 | 76 | intergenic (+18/+135) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (36/32); new base G (4/4); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTA > NC_002947/5913980‑5914263 | gagaTCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCaa > 4:209869/1‑149 (MQ=255) tCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggc < 3:209869/149‑1 (MQ=255) tCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggc < 5:260705/149‑1 (MQ=255) gAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGgcggcg > 4:73983/1‑149 (MQ=255) aCAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGtt < 8:227079/149‑1 (MQ=255) cAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttt > 7:197374/1‑149 (MQ=255) aGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGttttt < 8:197374/149‑1 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAgg < 4:120906/134‑1 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAgg > 3:120906/1‑134 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt < 5:80155/149‑1 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 5:153606/1‑149 (MQ=255) cATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgtt < 7:188933/148‑1 (MQ=255) cGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 3:289443/1‑146 (MQ=255) gATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCTTGAGGGGCGGCGTTttcgtttaca < 3:29135/148‑4 (MQ=39) gATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTgaga < 1:157957/149‑1 (MQ=255) tCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGAcc > 6:144072/1‑149 (MQ=255) cGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCg < 5:1483/148‑1 (MQ=255) gTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt > 5:190124/1‑137 (MQ=255) gTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTtttgttt < 6:190124/137‑1 (MQ=255) tCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCct < 5:144072/149‑1 (MQ=255) aCATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTAGCAACTGGTACATGAATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCTTTTTTGTTTGAGACCGGTGTCGCCctct > 1:275325/1‑149 (MQ=255) aGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTcc > 2:188387/1‑149 (MQ=255) aGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTcc > 4:274216/1‑149 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTccc > 7:131724/1‑149 (MQ=255) ggAAAGCGAGCTGGAAGAGTTCGAGCACTAGATCTCCGAACTCGAGTA‑CAACTGGTACATGCATACCGAGTAAAAGAAAACGCCGCCCCTCAAGGCCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCTCCCACGCCCGCAcc > 8:200147/1‑148 (MQ=255) aaaTCGATCTGGAAGTGTTCGATCACTCGATATCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGAGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCg < 7:200147/148‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgc < 8:207381/130‑1 (MQ=255) aaGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgc > 7:207381/1‑130 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg < 6:197707/149‑1 (MQ=255) gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg > 5:149639/1‑149 (MQ=255) ggAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAAttt > 7:198001/1‑149 (MQ=255) gAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGccc < 6:54526/130‑1 (MQ=255) gAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGccc > 5:54526/1‑130 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCg > 4:284977/1‑148 (MQ=255) gTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAgg < 6:153606/149‑1 (MQ=255) gatcACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGATTACGGCGCCCCTGTAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCGTCTTCGCGGGCACGCCCGCTCCCGc < 4:96858/126‑1 (MQ=255) gAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACAGTCTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTCTTTGAGACCGGTGTCGCCCTCTACGCGGGCACGCCCGCTCCCGc > 3:96858/1‑129 (MQ=255) gCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAg > 3:205030/1‑149 (MQ=255) cACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGc < 2:217878/149‑1 (MQ=255) cTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg > 3:28498/1‑107 (MQ=255) cTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTcgcg < 4:28498/107‑1 (MQ=255) cTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCt > 4:61787/1‑149 (MQ=255) tCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCACCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCGGAAGCCtg > 7:232610/1‑149 (MQ=255) gATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt < 4:205030/148‑1 (MQ=255) ccGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 3:270999/145‑1 (MQ=255) ccGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa > 4:270999/1‑145 (MQ=255) cGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 3:8724/144‑1 (MQ=255) cGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGAc < 8:131724/145‑1 (MQ=255) cGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACtt < 6:121695/147‑1 (MQ=255) cTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgt < 6:149639/149‑1 (MQ=255) cTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgt < 3:274216/149‑1 (MQ=255) tCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgtg > 7:249462/1‑149 (MQ=255) tCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCtgtg > 6:341728/1‑149 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCCTACCGCAGGGTAATTTGGAAGGCTGAAGCCGGTGTCTTACCGGTGGGAGCgg > 7:244713/1‑149 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggc > 7:8765/1‑48 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGggc < 8:8765/48‑1 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTGGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCggg > 5:139030/1‑149 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGAGGGAGCggg < 7:16623/149‑1 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc < 7:5378/149‑1 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc < 4:316255/149‑1 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc < 4:289443/149‑1 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt < 3:28562/124‑1 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt > 4:28562/1‑124 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGt < 1:188387/147‑1 (MQ=255) tGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCcgc > 1:263344/1‑148 (MQ=255) caaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc < 4:234908/128‑1 (MQ=38) caaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGc > 3:234908/2‑129 (MQ=38) aaaCAAAAACGCCGCCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTTGGAGCGGGCGTGCCCGCGATGACGGCGGcc > 6:89534/1‑149 (MQ=38) gAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCGGTGAGGTACCTGTGGGAGCGGGCGTGCCCGCGTAGAGGGCGGCCCAgg > 8:61722/1‑149 (MQ=255) gAAAACGCCGCCCCTCAAGGGCAGAGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCACCCGCAGGGGAAATTAGAAGGGGGAAGGCGGTGACATACCGGGGGGAGCGGGGGTGCCCGCGGAGAGGGGGGCCCAgg > 7:52185/1‑149 (MQ=255) aaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCt > 5:146569/1‑148 (MQ=255) aaCGCCGCCCCCCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCt > 2:58476/1‑148 (MQ=255) cgccgcCCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTa > 4:257882/1‑148 (MQ=255) cgccgcCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCAATTACCCGGCAACCCCCCAACCCCAAGGGAATTTAGAAAGCATAAACCATTGACTTTACTGTTGGAGCGGGCGTTCCCGCCAAAAAGGCCGCCCAAGCATa > 2:64330/1‑148 (MQ=255) gccgccCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTAc > 5:150419/1‑104 (MQ=38) gccgccCTTGAGGGGCGGCGTTTTCGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTAc < 6:150419/104‑1 (MQ=38) | GAGATCCTGAACAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCGTGCAAGGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTA‑CAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTA > NC_002947/5913980‑5914263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |