Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,929,549 T→A 7.4% H280L (CAC→CTC)  visC ← ubiquinone biosynthesis oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,929,5490TA 7.4% 183.1 / 3.5 63H280L (CAC→CTC) visCubiquinone biosynthesis oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (32/26);  new base A (3/2);  total (35/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCGCGCTCGCAAGCATTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCA  >  NC_002947/5929404‑5929694
                                                                                                                                                 |                                                                                                                                                 
aCCGCGATCGCAAGCATTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAATCCGAGGTTCACACACTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCAACGATCAAGACCAGGCCTTAATCCACTTAGCGCTAGGCGTGTc                                                                                                                                                >  8:325911/1‑149 (MQ=255)
 ccGCGCTCGCAAGCATTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGACCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCg                                                                                                                                               >  4:52672/1‑149 (MQ=255)
   gcgcTCGCAAGCATTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCt                                                                                                                                             <  1:110054/149‑1 (MQ=255)
               aTTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGACCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGgca                                                                                                                                 <  3:52672/149‑1 (MQ=255)
                           cTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGAGTCGCTGGCGCAGCGGCACGCACACCCGTg                                                                                                                     >  3:121080/1‑149 (MQ=255)
                           cTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGAGTCGCTGGCGCAGCGGCACGCACACCCGTg                                                                                                                     >  3:116142/1‑149 (MQ=255)
                              agccagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTggg                                                                                                                   <  4:228640/148‑1 (MQ=255)
                              agccagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTgg                                                                                                                    <  2:11187/147‑1 (MQ=255)
                              agccagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGt                                                                                                                  >  8:35175/1‑149 (MQ=255)
                              agccagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGt                                                                                                                  >  3:106572/1‑149 (MQ=255)
                               gccagcACCGCCGCGTCTAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTc                                                                                                                 <  4:283892/149‑1 (MQ=255)
                                ccagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCg                                                                                                                <  1:32192/149‑1 (MQ=255)
                                 cagcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCgg                                                                                                               >  3:47435/1‑149 (MQ=255)
                                  agcACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGc                                                                                                              <  4:106572/149‑1 (MQ=255)
                                      ccgccgCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGa                                                                                                          <  2:114336/149‑1 (MQ=255)
                                       cgccgcGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTg                                                                                                           >  4:308033/1‑147 (MQ=255)
                                        gccgcGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAg                                                                                                        <  7:325911/149‑1 (MQ=255)
                                        gccgcGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAg                                                                                                        <  7:35175/149‑1 (MQ=255)
                                                  ggAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCACAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGcc                                                                                               >  4:116704/1‑148 (MQ=255)
                                                   gAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGcc                                                                                               >  6:301474/1‑147 (MQ=255)
                                                   gAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGcc                                                                                               >  1:18903/1‑147 (MQ=255)
                                                     aGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGAGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGa                                                                                           >  4:286012/1‑149 (MQ=255)
                                                                acacCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGaa                                                                                <  3:308033/149‑1 (MQ=255)
                                                                 cacCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGAACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAg                                                                               <  5:238996/149‑1 (MQ=255)
                                                                  acCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGAATCACAGATAAAGACCAGGCCTTCATCCAAGTTGCGCTTGGCGTGTAGATGGCTCAGCGGCACGCAAACCCGTGGGTCGGCATGAAGCCCATCGCCCAGACGCCCTTCGAAgg                                                                              >  3:130869/1‑149 (MQ=255)
                                                                    ccTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGcc                                                                            >  7:196606/1‑149 (MQ=255)
                                                                      tGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCg                                                                          >  7:191141/1‑149 (MQ=255)
                                                                       gCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCg                                                                          >  4:317349/1‑148 (MQ=255)
                                                                         ccGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTc                                                                       >  7:213682/1‑149 (MQ=255)
                                                                         ccGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTc                                                                       >  5:71081/1‑149 (MQ=255)
                                                                                gTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGcc                                                                >  6:129648/1‑149 (MQ=255)
                                                                                 tGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCt                                                               >  5:290782/1‑149 (MQ=255)
                                                                                    gTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCg                                                                                                                <  3:2703/97‑1 (MQ=255)
                                                                                    gTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCg                                                                                                                >  4:2703/1‑97 (MQ=255)
                                                                                    gTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTg                                                              >  7:163655/1‑147 (MQ=255)
                                                                                        aTGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGaa                                                        <  4:47435/149‑1 (MQ=255)
                                                                                                tgCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGgcac                                                                                                                                >  7:81786/1‑69 (MQ=255)
                                                                                                tgCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGgcac                                                                                                                                <  8:81786/69‑1 (MQ=255)
                                                                                                tgCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCtt                                                >  7:73482/1‑149 (MQ=255)
                                                                                                tgCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCt                                                 <  6:71081/148‑1 (MQ=255)
                                                                                                tgCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCt                                                 >  1:153797/1‑148 (MQ=255)
                                                                                                  cagcaTCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTc                                               <  5:301474/148‑1 (MQ=255)
                                                                                                     caTCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTcatc                                            >  8:94634/1‑148 (MQ=255)
                                                                                                     caTCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTcatc                                            >  1:122744/1‑148 (MQ=255)
                                                                                                      aTCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTcatcca                                          >  2:283380/1‑149 (MQ=255)
                                                                                                         aCCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCg                                       >  5:337898/1‑149 (MQ=255)
                                                                                                         aCCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCg                                       <  2:122744/149‑1 (MQ=255)
                                                                                                           cGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGc                                      >  1:177452/1‑148 (MQ=255)
                                                                                                              tCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCAt                                   >  1:336532/1‑148 (MQ=255)
                                                                                                              tCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATc                                  <  2:18903/149‑1 (MQ=255)
                                                                                                                aaGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACTCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCa                                 <  8:213682/148‑1 (MQ=255)
                                                                                                                   aCCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTc                                                                                   <  3:311419/95‑1 (MQ=255)
                                                                                                                   aCCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTc                                                                                   >  4:311419/1‑95 (MQ=255)
                                                                                                                       ggCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCg                         <  1:297215/149‑1 (MQ=255)
                                                                                                                          cTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCa                      <  7:94634/149‑1 (MQ=255)
                                                                                                                              aTCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTcatccat                                         <  3:167988/126‑1 (MQ=255)
                                                                                                                              aTCCACCTAGCGCTTGGCGAGACGCTGGCGCAGCGGCACGCACACCCGTGGCTCGGCCTGAAGCACCTCGCCCAGACGCCCTACGAAGGCCCGCTCCACGGCCTGCAGGAAGGCCGCTTcaaccaa                                         >  4:167988/1‑125 (MQ=255)
                                                                                                                                     tAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGggt           >  2:215673/1‑149 (MQ=255)
                                                                                                                                       gcgcTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGggtg          <  3:286012/148‑1 (MQ=255)
                                                                                                                                       gcgcTTGGCGAGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGggtg          <  4:116142/148‑1 (MQ=255)
                                                                                                                                       gcgcTTGGCGAGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGggtg          <  4:121080/148‑1 (MQ=255)
                                                                                                                                         gcTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTc       >  2:327078/1‑149 (MQ=255)
                                                                                                                                              gCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCa  <  2:153797/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
ACCGCGCTCGCAAGCATTGACCAGCACCTCAGCCAGCACCGCCGCGTCGAGGAAGCCGAGGTTCACACCCTGCCCGGCCAGTGGGTGAATGGTGTGTGCAGCATCACCGATCAAGACCAGGCCTTCATCCACGTAGCGCTTGGCGTGTCGCTGGCGCAGCGGCACGCACACCCGTGGGTCGGCCTGAAGCACCTCGCCCAGACGCCCTTCGAAGGCCCGCTCCAGGGCCTGCAGGAAGGCCGCTTCATCCATCGCCATCAACTGCTCGGCATGCTCCGGGGTGGTCGACCA  >  NC_002947/5929404‑5929694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: