| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,962,276 | G→T | 6.3% | G391V (GGC→GTC) | lysA‑II → | diaminopimelate decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,962,276 | 0 | G | T | 6.3% | 253.2 / 5.1 | 79 | G391V (GGC→GTC) | lysA‑II | diaminopimelate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base G (36/38); new base T (2/3); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
GCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCC > NC_002947/5962129‑5962423 | gCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGc > 1:144108/1‑149 (MQ=255) agaCTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGAc < 1:73840/149‑1 (MQ=255) gACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGtt > 8:107927/1‑149 (MQ=255) cTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCTAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGCCGTCGACCAggatttca < 5:15661/149‑7 (MQ=255) ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa < 6:122077/148‑1 (MQ=255) ccTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGaa < 1:158018/148‑1 (MQ=255) cTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACAGGGCGt < 4:19548/142‑1 (MQ=255) cTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACAGGGCGt > 3:19548/1‑142 (MQ=255) aaGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTAcgccg > 1:236703/1‑149 (MQ=255) ggACCGCGTCCGCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTAcgccgcc < 4:115358/149‑1 (MQ=255) gcgTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTAcgccgccgc > 8:114936/1‑146 (MQ=255) cTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGt > 3:199485/1‑149 (MQ=255) gCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAAc < 5:43544/148‑1 (MQ=255) cGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTg > 4:286272/1‑148 (MQ=255) cGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGt < 4:235888/149‑1 (MQ=255) gAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGc < 8:262798/140‑1 (MQ=255) gAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGc > 7:262798/1‑140 (MQ=255) aaGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTAt > 6:114829/1‑149 (MQ=255) tGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCACCTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTg < 7:114936/149‑1 (MQ=255) tGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGAc < 8:205403/100‑1 (MQ=255) tGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGAc > 7:205403/1‑100 (MQ=255) tGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTg < 2:144108/149‑1 (MQ=255) aCCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGc < 8:108161/149‑1 (MQ=255) ccTGCTGGCGGTAGAGTGCGCGGGCGCCT‑ATGGTTTTGTGATGAGCTCCAACTACTACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGc < 7:287150/148‑1 (MQ=255) ccTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGc < 7:107927/148‑1 (MQ=255) ctgctgGCCGTAGAGTCCGC‑GGCGCCTCATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCg > 1:190237/1‑148 (MQ=255) gCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCct < 6:170494/149‑1 (MQ=255) cGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCctgc > 6:285877/1‑149 (MQ=255) agagTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCtgctgc > 5:165594/1‑149 (MQ=255) agTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCg < 1:242914/149‑1 (MQ=255) agTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCg < 5:285877/149‑1 (MQ=255) tCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGa < 8:203401/149‑1 (MQ=255) cT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCtgctgc < 3:311252/134‑1 (MQ=255) cT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCtgctgc > 4:311252/1‑134 (MQ=255) cT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTaa > 2:339953/1‑142 (MQ=255) cT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTaa < 1:339953/142‑1 (MQ=255) cT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCAtg > 8:40452/1‑149 (MQ=255) aTGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTa < 4:112384/149‑1 (MQ=255) cTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCAtgctgct > 5:86815/1‑136 (MQ=255) cTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCAtgctgct < 6:86815/136‑1 (MQ=255) ccAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAg < 6:29632/147‑1 (MQ=255) ccAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGaa > 5:29632/1‑148 (MQ=255) ccAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGAt > 6:47045/1‑149 (MQ=255) cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGttt > 5:140592/1‑139 (MQ=255) cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGttt < 6:140592/139‑1 (MQ=255) cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATg > 3:243027/1‑149 (MQ=255) cAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATg > 4:4238/1‑149 (MQ=255) tACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtg > 5:148043/1‑149 (MQ=255) acaacaCCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgg > 7:103591/1‑149 (MQ=255) acaacaCCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgg > 3:158511/1‑149 (MQ=255) aacaCCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggc < 4:243027/149‑1 (MQ=255) cacCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctg < 3:4238/149‑1 (MQ=255) acCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctgg > 1:114452/1‑149 (MQ=255) acCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctgg < 6:165594/149‑1 (MQ=255) acCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACAGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctgg > 4:222553/1‑149 (MQ=255) ccGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGCCCGTCGCCGCACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTACGCCCATGCGGCTGCGGTTTACaaa > 8:119116/1‑133 (MQ=255) gcgGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCaa < 3:222553/149‑1 (MQ=255) cgGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAAc < 6:148043/149‑1 (MQ=255) cGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctg < 4:30730/139‑1 (MQ=255) cGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAtgggctg > 3:30730/1‑139 (MQ=255) gTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACtt > 4:55559/1‑149 (MQ=255) gcTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATgg > 3:215413/1‑149 (MQ=255) tGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTc < 5:47045/149‑1 (MQ=255) tGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTAGCCGAACTGTATGCTCGCGAAAGCCTGCTGCCGGAGTAAGCCGATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGCCTTCATGGTc > 3:314468/1‑149 (MQ=255) aaTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAt > 6:186018/1‑122 (MQ=255) aaTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCAt < 5:186018/122‑1 (MQ=255) aaTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTg > 3:302351/1‑149 (MQ=255) cgccTGGTCGCCGTCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGtttt > 3:93407/3‑109 (MQ=255) cgccTGGTCGCCGTCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGtttt < 4:93407/107‑1 (MQ=255) aTCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTgg < 5:114829/149‑1 (MQ=255) cTGGTCGCCGTCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCAGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCAtgctgctgc < 6:202458/101‑1 (MQ=255) cTGGTCGCCGTCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCAGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCAtgctgctgc > 5:202458/1‑101 (MQ=255) cTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGAcc < 3:286272/149‑1 (MQ=255) ggTCGACGGCGACCAGGCATTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTg > 8:234709/1‑149 (MQ=255) gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTg < 4:158511/148‑1 (MQ=255) gTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTg < 4:199485/148‑1 (MQ=255) gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGt > 6:106988/1‑147 (MQ=255) gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTca < 8:103591/149‑1 (MQ=255) gACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTca < 2:114452/149‑1 (MQ=255) ggCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcagcc < 5:106988/149‑1 (MQ=255) ggCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTcagc > 3:180049/1‑148 (MQ=255) | GCGAGACTGGCGACTTCCTCGGCAAGGACCGCGTCCTCAACCTGGCCGAAGGTGACCTGCTGGCCGTAGAGTCCGCGGGCGCCT‑ATGGTTTTGTCATGAGCTCCAACTACAACACCCGCGGCCGTTGCGCTGAAATCCTGGTCGACGGCGACCAGGCGTTCGAAGTACGCCGCCGCGAGACCGTCGCCGAACTGTATGCTGGCGAAAGCCTGCTGCCGGAGTAAGCCCATGCTGCTGCGTTTTACCAAGATGCATGGGCTGGGCAACGACTTCATGGTCCTGGACCTGGTCAGCC > NC_002947/5962129‑5962423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |