| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 513,469 | C→A | 6.1% | intergenic (‑116/‑75) | crp ← / → yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 513,469 | 0 | C | A | 6.1% | 240.8 / 4.1 | 75 | intergenic (‑116/‑75) | crp/yhfA | DNA‑binding transcriptional dual regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (36/34); new base A (2/3); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
TCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGTCGTCG > NC_002947/513326‑513613 | tCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACAt < 2:144624/148‑1 (MQ=255) ttGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTGTCGGTTTAGTACCGAAACAtctc < 6:300344/149‑1 (MQ=255) ggCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTTGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTGTCGGTTTAGTACCGAAACAtctc < 3:171781/147‑1 (MQ=255) ggCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACAtc < 6:335319/145‑1 (MQ=255) tAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACAtct > 1:310505/1‑140 (MQ=255) tAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACAtct < 2:310505/140‑1 (MQ=255) cACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGATGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGt < 5:190485/149‑1 (MQ=255) aCGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGt < 7:176567/148‑1 (MQ=255) aCGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGt < 7:116800/148‑1 (MQ=255) aCGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTc > 2:132066/1‑149 (MQ=255) gAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCt < 7:184549/125‑1 (MQ=255) gAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCt > 8:184549/1‑125 (MQ=255) acTGTTCGATATGACCCATAGGCTTTTTAAGAGTGTGGCTGACGGAGAGCGCCAGTCATTTGCCGCCAGCTTATCAGACACTACGAGATCGTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTg < 6:307769/148‑1 (MQ=255) tGTTCGATATGACGCATAGGCTTTTTTAGAGGGTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGa > 1:215794/1‑148 (MQ=255) ttCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGa > 5:271950/1‑146 (MQ=255) ttCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGa < 6:271950/146‑1 (MQ=255) aCGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTcc < 2:215794/148‑1 (MQ=255) gCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGa > 6:43900/1‑148 (MQ=255) aTAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGaaaa > 3:127092/1‑149 (MQ=255) aTAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGaaaa > 7:65088/1‑149 (MQ=255) gCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg > 7:68877/1‑149 (MQ=255) gCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg < 8:65088/149‑1 (MQ=255) ttttttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCca < 3:225247/104‑1 (MQ=255) ttttttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCca > 4:225247/1‑104 (MQ=255) ttttttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAg > 5:178312/1‑147 (MQ=255) ttttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGa < 1:132066/147‑1 (MQ=255) ttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGaa > 3:210076/1‑137 (MQ=255) ttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGaa < 4:210076/137‑1 (MQ=255) ttAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTcc > 2:6991/1‑149 (MQ=255) agagGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCgg > 1:336140/1‑149 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGATACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACAccc > 5:93856/1‑122 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGATACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACAccc < 6:93856/122‑1 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACAccc < 3:203729/122‑1 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACAccc > 4:203729/1‑122 (MQ=255) gTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAg < 6:178312/149‑1 (MQ=255) ggCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAATACGACACATCTCGTCCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGAt > 7:251191/1‑148 (MQ=255) gCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGa < 5:43900/149‑1 (MQ=255) cGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCa < 2:336140/149‑1 (MQ=255) gagCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGt > 7:87173/1‑134 (MQ=255) gagCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGt < 8:87173/134‑1 (MQ=255) cgcCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATc > 8:82021/1‑148 (MQ=255) ccAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAg > 3:104668/1‑149 (MQ=255) cAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGt < 4:127092/149‑1 (MQ=255) aTTAGGCGCCAGATTATCAGACACTACGAGATGTTTCGGTACTAATCCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGACGGCACGTATCCAGTGGGcc < 5:333288/149‑1 (MQ=255) ggCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGt < 7:263111/80‑1 (MQ=255) ggCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGt > 8:263111/1‑80 (MQ=255) ggCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGt < 7:289923/148‑1 (MQ=255) gcCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAgg > 1:130971/1‑149 (MQ=255) ttATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGt > 5:259101/1‑149 (MQ=255) cAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTTGTTCCCACAGCCGCACAAAGTCTAAGATGACACACTTTTCCGAAAATCAGGAGTCCGGGTAAATGAAGGCACGAAACCATTGGCCCGGTGAGGCAATgatac > 1:76465/1‑145 (MQ=255) gACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCg > 5:8068/1‑149 (MQ=255) gACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCg > 7:166005/1‑149 (MQ=255) acacTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCgg < 7:82021/149‑1 (MQ=255) acTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCg < 6:259101/149‑1 (MQ=255) tACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCg < 1:106779/126‑1 (MQ=255) tACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCg > 2:106779/1‑126 (MQ=255) tACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCAAGTGGGCCGGTGAGGCAATGTTCCTCGGCGaa > 1:266389/1‑149 (MQ=255) aCGAGATGTGTCGGTTTAGTACCGAAACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAAt > 1:142346/1‑149 (MQ=39) cGAGATGTTTCGGTACTAATCCGACAGATCTCGTGCTT‑TTCCCACAGCCGCACTAGCTCTAAGCTGACTCCCTTTTCCGTAAATCAGGAGTCCGGGTTGATGAAGGCACGTATCGAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAAt < 2:76465/148‑1 (MQ=255) cGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGaa > 7:281104/1‑104 (MQ=255) cGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGaa < 8:281104/104‑1 (MQ=255) cGAGATGTGTCGGTTTAGTACCGAAACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTc > 3:53126/1‑77 (MQ=18) cGAGATGTGTCGGTTTAGTACCGAAACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTc < 4:53126/77‑1 (MQ=18) gagaTGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCg > 7:190476/1‑149 (MQ=255) agaTGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCgg < 2:130971/149‑1 (MQ=255) gTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCAAAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAg > 1:248887/1‑149 (MQ=255) ggTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTc < 5:309080/127‑1 (MQ=255) ggTACTAAACCGACACATCTCGTGCTT‑ATCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTTGAAGAAGGCACGTATCCACTGCGCCGGTGAGGCAATGTTc > 6:309080/1‑127 (MQ=255) tACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCAc > 1:141511/1‑96 (MQ=255) tACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCAc < 2:141511/96‑1 (MQ=255) tAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATgtc > 6:207181/1‑149 (MQ=255) tAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACCTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCgg > 8:319411/1‑135 (MQ=255) tAAACCGACACATCTCGTGCTT‑TTCCCACACCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCgg < 7:319411/135‑1 (MQ=255) aaaCCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATgtcg > 6:35452/1‑149 (MQ=255) ccGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGtcgtcg < 8:190476/149‑1 (MQ=255) | TCTTGGCGGGTAGGGCGGAGGCAACCATCACGAAATCCTGTTCGATATGACGCATAGGCTTTTTTAGAGGTTGGCTGACGGAGAGCGCCAGTCATTTGGCGCCAGCTTATCAGACACTACGAGATGTTTCGGTACTAAACCGACACATCTCGTGCTT‑TTCCCACAGCCGCACAAGGTCTAAGCTGACACCCTTTTCCGAAAATCAGGAGTCCGGGTAGATGAAGGCACGTATCCAGTGGGCCGGTGAGGCAATGTTCCTCGGCGAATCGGGGAGCGGCCATGTCGTCG > NC_002947/513326‑513613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |